Methanobacterium alkalithermotolerans: HYG87_09275
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Entry
HYG87_09275 CDS
T07794
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
meme
Methanobacterium alkalithermotolerans
Brite
KEGG Orthology (KO) [BR:
meme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meme03016
]
HYG87_09275
Enzymes [BR:
meme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HYG87_09275
Transfer RNA biogenesis [BR:
meme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HYG87_09275
Prokaryotic type
HYG87_09275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
MS_channel_2nd
Motif
Other DBs
NCBI-ProteinID:
QUH23932
UniProt:
A0A8T8K7W4
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All DBs
Position
1862196..1863158
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AA seq
320 aa
AA seq
DB search
MENFLIKAESETSSLYGCWPDKRPIEEHLRLGVINLDKPSGPTSHEVDSWVRRILHADKT
GHGGTLDPRVTGILPVGVDNATRVIQLLLGAPKEYVCLMRLHHEVDEEDIRNILAEFQGK
IYQTPPLKSAVKRELRVRNIYYINILEIQDKDVLFIIGCEAGTYIRKYCHDIGEALGIGA
HMAELRRTKAGPFVEDETLTTLHDLNDAYHYWKEDNDESFLRKCVLPMEVAVTHLPKIVI
RDSAVDAICHGADLAAGGIVGLDDNIKKGDLISVQTLKGELVASGESMDNSLEILQSEKG
IMVDIKKVFMEPGTYPRMWK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttctaattaaggctgaaagtgaaaccagttctctttatgggtgctggcct
gataaaaggcctattgaagaacacctacgtctgggcgtcattaatctagacaagccttct
ggacctacctcccatgaagtggattcctgggttcgtagaattttacatgctgataaaacc
ggtcatggtggaaccctggatccccgggttactggcatactgcctgtgggagtagataat
gctacccgggtaatccagttactcctgggggctcccaaagaatatgtttgtttaatgaga
ctacatcatgaagttgatgaagaggatataagaaacatattggctgaatttcagggtaaa
atatatcaaactcctcctttaaaatctgcagtaaaaagagaactaagagtcaggaatatt
tattacataaatatcctggagatacaggacaaagatgttttattcatcattggatgtgag
gcaggaacttatattcgtaagtactgccatgatattggtgaagcactgggcattggggcc
catatggcggaactacgccgaactaaagcaggcccctttgtggaggatgaaactttaacc
accctgcatgatctcaatgatgcttatcattactggaaggaggataatgatgagtccttc
cttagaaaatgcgtacttcccatggaagtagcagttacccatttacctaaaatagtaatt
cgtgattccgcagtggatgctatatgccatggtgcagacttagcagcagggggtatagtt
ggactggatgataacatcaaaaaaggtgatttaatatcagttcaaacccttaaaggtgag
ctggtggcttctggtgaaagtatggataattcactggaaatattacaatctgagaaaggt
attatggtagatataaaaaaggtttttatggaaccgggaacatatcctaggatgtggaaa
taa
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