KEGG   Metallosphaera sedula MJ1HA: MJ1HA_0139
Entry
MJ1HA_0139        CDS       T08286                                 
Name
(GenBank) 3'-flap repair endonuclease Xpf
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
memj  Metallosphaera sedula MJ1HA
Pathway
memj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:memj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MJ1HA_0139
   03460 Fanconi anemia pathway
    MJ1HA_0139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:memj03032]
    MJ1HA_0139
   03400 DNA repair and recombination proteins [BR:memj03400]
    MJ1HA_0139
DNA replication proteins [BR:memj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    MJ1HA_0139
DNA repair and recombination proteins [BR:memj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     MJ1HA_0139
SSDB
Motif
Pfam: ERCC4 HHH_5 HHH_2 5_3_exonuc
Other DBs
NCBI-ProteinID: BBL46050
LinkDB
Position
complement(96459..97151)
AA seq 230 aa
MLRIYADTREKQSGIPDLLRDLGALVFLQQLSVGDYIVADGVAVERKNVFDLMNSVFDKR
FFDQLERLREVYSKVFILVEGNLEGAKTITTKWKIFNSALITATVDYDVGVLYSLDKRES
AEVLVTLARRYQERGVERKPISLHDKPKFESLDEMQLYLVQSLPNVGGKIALRLLTEFST
VRNICNSSIADLERVMKSRKKAELLYKIFNTKFSSNSDKKSASLTDFVEE
NT seq 693 nt   +upstreamnt  +downstreamnt
atgctgagaatttacgccgatactagggagaagcaatctggaattcctgaccttttacgc
gatctgggtgctttagtcttcttacagcagttatctgttggggactatatagtagctgac
ggggttgcagtggaaaggaaaaatgtttttgacttgatgaattctgtttttgacaagaga
tttttcgaccaactggaaaggctcagggaagtctactcaaaggtattcattcttgtggag
gggaatttggagggagccaagacaattacaactaagtggaagattttcaactctgccctc
attactgccactgtggattatgatgttggcgtcctttattctctagataagagggaatct
gcagaagtgttggttaccctggcaagaaggtaccaggagaggggtgtagagagaaagcct
atttcccttcatgacaaacctaagtttgaaagtttagatgagatgcagctctacctcgtt
caatctctgcccaacgtgggaggaaagatagccctaaggttgttaacagaattttccaca
gtaagaaatatatgtaattctagtatagcagaccttgagagagtaatgaagagcaggaaa
aaagcggaacttctgtataagatattcaatacgaagttctctagtaattcagataagaag
tctgcgtcgctgacagattttgtagaggaataa

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