Metallosphaera sedula MJ1HA: MJ1HA_0876
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Entry
MJ1HA_0876 CDS
T08286
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
memj
Metallosphaera sedula MJ1HA
Brite
KEGG Orthology (KO) [BR:
memj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
memj03400
]
MJ1HA_0876
DNA repair and recombination proteins [BR:
memj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MJ1HA_0876
Archaeal homologous recombinant proteins
MJ1HA_0876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
Rad50_zn_hook
AAA_13
AAA_23
AAA_21
AAA_15
HOOK
SbcC_Walker_B
AAA_27
ABC_tran
AAA_29
TMF_TATA_bd
EzrA
DUF1664
ATG16
Fib_alpha
ADIP
RsgA_GTPase
DUF5082
FlaC_arch
ATG17_like
Uso1_p115_C
Crescentin
BLOC1_2
ABC_tran_CTD
Spectrin
Motif
Other DBs
NCBI-ProteinID:
BBL46776
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Position
732840..735416
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AA seq
858 aa
AA seq
DB search
MRLDRVSLKDFLSHEKTTVSFKGDINVIVGQNGAGKSSIIEAITFALFREGKGKQEEMVK
KGKANAELELVLRDNNLEVRVLRKIPPGDQLYVNGKLTARGTKEVTKKIEELGLNSKVVT
STMIVRQGEIETIFDTLTDVLKRVMMIDNLEKLTESGGKIKQLMDKYDQEVRSHEIYLEN
LRRLQEEKSSLEREISSLTERMEKTREELQKLESEEAKLKDKIKDLEEKQREYDVLLSEK
RRAEDELQRVMAELRNLEGLERRISNLEDKEKELEKIVSLSDTILDLEGKRARLTDRKNE
FERVKRQFEKKSKEFEQKRKLEPRHEEYQRVVSRLKELEEYHERFTSLYSTLRNLMERKN
KIEQEVRMLPRIAVEEIQTRLDSVSKELDEAASLQKERKVEYDQIRKSLDALLSATEGKC
PVCGGPLDEPHRQELTQKYRQRLTELSKELKDLEGKLESLKRDKSRLEDEHKRAIRIDAE
RRGKENDLEGLSSDIARLELDLKQLKELEEEFRTMQRRKDELENDERSYLQVQGVSEAEV
MELEDQMATYSHDISTLEEEIHQLEGRVGNLTKQDVESAKGQLEKVRRELSELQRKRGEK
TNLESRMAELKRSVDELSRRIQLLGFRRQDLEQMRRDLEVLSKQLREVHGDLGNLEGKLN
QVKGRHQEVENEIAQLQEKVKEVEKSRRAKERLEKLRKVLSEGMLQSYLISTLKGRIENN
LNDIVSMFDISYTRILVNMTQTKTLSGKVELTALNQSGQQLSIGMLSGGEKIAVALALRL
AIARALTGEIGFMILDEPTVHLDSMRRAELLSVIRESMNVVPQIIVVTHDDEVLRIADYV
IRVEKVGESSRVKEEIAQ
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgacagggtctccctgaaagatttcctcagccacgaaaaaactaccgtctcc
tttaagggagacattaacgtcatagtgggacagaacggtgccggaaaaagctcaatcatt
gaggcaattacctttgccctctttagggaagggaagggtaagcaggaggagatggtaaag
aagggaaaggccaatgctgagctggagctcgttctcagggacaacaacctcgaggtaagg
gttctcaggaaaatacctcctggtgatcagctctatgtcaacggcaagcttacggccagg
ggcaccaaggaggtgacaaagaagatcgaggaactgggtctcaacagcaaggtggtcacc
tcgaccatgatagttagacagggcgagatagagacgatctttgacacgttgacggatgtg
ctcaagagggtaatgatgatagacaacctggagaaactcaccgaatctggaggaaagatc
aagcaactcatggacaaatatgaccaggaggtcagatcccatgagatttaccttgagaat
ctcaggaggcttcaggaggaaaagtcaagcctcgaaagggaaatctcctccctgaccgag
aggatggaaaagacgagagaggaactgcagaaactggagagcgaggaagccaaactaaag
gacaagataaaggatctagaggagaagcagagggaatatgacgtcctactctcagagaag
aggcgggcagaggacgaattgcaaagggtgatggcggagctcaggaatttagagggactt
gagcgtaggatctccaatctcgaggacaaggagaaggagttagagaaaatagtttctctg
agtgataccatccttgaccttgagggcaagagggccaggttaacggataggaagaatgag
tttgaaagggtaaagagacagttcgagaaaaagagcaaggagtttgagcagaagagaaag
ctagagcctagacacgaagagtatcagagggttgtatcaaggcttaaggaactagaggaa
taccatgagagattcaccagcctgtactcaactctcaggaacttaatggaacgtaaaaat
aaaatcgaacaggaggtgaggatgcttccaaggattgcggtggaggagattcagacgagg
cttgactcggtctctaaggagctagacgaagcggcctcacttcaaaaggaaagaaaggtg
gagtatgatcagataaggaaaagcctagacgctctcctttcagctacagaggggaagtgt
ccagtatgcggtggcccattggacgaaccccatagacaggagcttactcagaaatacagg
caacgtctgacggagttgagcaaggagctcaaggacctggagggtaagttggaaagtctc
aaaagggacaagtcacgtctggaggatgaacataagagggccataaggatagacgcggaa
agaaggggtaaggagaatgacctggagggcctatccagcgatatagcacggttagaattg
gatctcaaacaattgaaggaactcgaggaggaattcaggaccatgcaaaggaggaaggac
gaacttgagaacgacgaaaggagttacctccaggtacagggggtcagcgaggctgaagtg
atggagctagaggatcagatggctacctattcccacgacatttccacactggaggaggaa
attcatcagctagaggggagagtgggaaacctcacgaagcaggacgtggaaagcgctaag
ggtcagctggaaaaagtgcgcagggaactatctgagctacagaggaaaaggggggagaag
acgaaccttgaatccagaatggcggaactgaagaggagcgttgacgagctttccaggagg
attcagctccttgggttcaggagacaagatctagaacagatgaggcgagacctcgaggtg
ttaagtaaacagctcagggaagttcacggagatcttggaaacctcgagggtaaacttaac
caggttaaggggaggcatcaggaggttgagaacgagattgctcaactccaggagaaggtc
aaggaggtggagaagagtaggagggctaaggagcgccttgagaagctaagaaaggtgctt
tccgagggaatgcttcagtcatacctaatttctacgctcaagggaaggatagagaataat
ctcaatgacatagtttccatgtttgatatctcgtatacgaggatactcgtaaacatgacc
cagaccaagaccctcagtggaaaggttgagctcacggccctgaatcagtccggccagcaa
ctctccatagggatgttgagcggaggcgagaagatcgcggttgccctagcccttagactt
gccatagccagggcccttacaggggagataggtttcatgatattggacgagcccacggtt
catctagattccatgagaagggccgaactgctctcggtgataagggagtccatgaacgtt
gtaccccagattatagttgtaacccacgacgatgaggtattaaggatagcggattacgta
ataagggtagagaaagtgggggagagtagcagggtgaaggaggagatcgctcagtga
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