Metallosphaera sedula MJ1HA: MJ1HA_1858
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Entry
MJ1HA_1858 CDS
T08286
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
memj
Metallosphaera sedula MJ1HA
Brite
KEGG Orthology (KO) [BR:
memj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MJ1HA_1858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
memj03021
]
MJ1HA_1858
03019 Messenger RNA biogenesis [BR:
memj03019
]
MJ1HA_1858
Transcription machinery [BR:
memj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MJ1HA_1858
RNA polymerase I system
MJ1HA_1858
Messenger RNA biogenesis [BR:
memj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
MJ1HA_1858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
BBL47753
LinkDB
All DBs
Position
1638199..1638660
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AA seq
153 aa
AA seq
DB search
MEAPKVRNFYAVKVTGGQEISVAIMLEERIKTNGIGDVYSIIVPPGLKGYVIVESSGPHV
VKFIIAGIRHVRGVAPGLVPKDDIMKMVSKKQTGPSIKTGDMVEVVSGPFRGMQAQVMSY
NADRGEVVLNILESAFPLQVTIPVDQIRPVKKT
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcaccgaaagttaggaacttctatgccgtgaaggttacagggggtcaggaaata
agtgtcgcaattatgcttgaggagagaattaagacaaacggcattggagacgtttactcc
atcatagtcccgccaggactcaagggatatgttattgtggagagttctggtccacatgtg
gtgaagttcatcatcgctggtatcaggcatgtgagaggcgttgcccctgggcttgttccc
aaggatgacattatgaagatggtatcaaagaagcagacaggtccttccataaagacaggt
gacatggtggaggtcgtgtcaggcccattcaggggaatgcaggcccaggtcatgagttat
aatgcggatcgcggagaagtagttttaaatatactagaatcggcctttcctctacaggta
acaatacctgtagaccaaattagacccgttaaaaagacgtaa
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