Metallosphaera sedula MJ1HA: MJ1HA_2530
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Entry
MJ1HA_2530 CDS
T08286
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
memj
Metallosphaera sedula MJ1HA
Pathway
memj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
memj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MJ1HA_2530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
memj03021
]
MJ1HA_2530
Transcription machinery [BR:
memj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MJ1HA_2530
Prokaryotic type
Archaeal type
TFB
MJ1HA_2530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
HTH_AsnC-type
BRF2-like_C_cyclin_rpt
HTH_24
HTH_Tnp_ISL3
HTH_Crp_2
PF0610-like_N
Sigma70_r4_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BBL48405
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Position
2213222..2214151
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AA seq
309 aa
AA seq
DB search
MVNLMSKENSSDTQCPPDKIIFDADRGEYICSETGEVIEERIVDQGPEWRAFTPEEKEKR
SRVGGPLNQTIHDRGLSTLIDWKDKDAIGRNLDPKRRLEVLRWRKWQIRARIQSSIDRNL
AQAMNELERIGNLLGLPKSVKDEGALIYRKAVEKGLVRGRSIESVVAAAIYASCRRMKIA
RTLDEIAQYTKANRKEVARCYRLLLRELNVDVPVSDPKDYVTRIGSLLGLSGASMKLAAE
ILEKAKNVGLTAGKDPAGLAAAAIYIAALLNEERRTQKEIAQVAGVTEVTVRNRYKELIQ
ELKIEIQNQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacctcatgagtaaggaaaattcatctgatactcaatgcccccctgataaaata
attttcgacgctgacaggggggagtacatatgctctgaaactggtgaagttatagaggaa
aggatagtagaccaaggtccagagtggagagccttcactccggaggaaaaggagaaaagg
agcagggttggtggacccctcaatcagaccatacatgatcgcgggttgtccacactgatt
gactggaaggataaggatgccataggaagaaaccttgacccaaagaggagattggaagta
ctgagatggagaaagtggcagattagggccaggattcagagttccatagataggaacctc
gcccaagccatgaatgagctggaaaggattggcaacctgctaggtcttccaaaatccgta
aaggatgagggcgctctcatttacaggaaggcagttgagaagggtctagtcagaggaaga
tcaatagagagcgtcgtagctgcggcaatctacgcttcctgtagacgtatgaaaattgct
agaactttggatgaaatagcgcaatacacaaaggcaaacagaaaggaagtggccaggtgt
tataggcttctattgagggaacttaacgttgatgttccagttagtgatccaaaggactac
gttaccagaataggatccttacttgggctcagcggagcatccatgaagcttgccgcagag
atattggagaaggccaagaatgttgggttaacagctggaaaagatccagcaggactggct
gcagctgcaatttacattgctgcactcctcaacgaggagagaagaacccagaaagagata
gctcaggtcgctggagtaaccgaagtgactgtcagaaacagatacaaagaacttatccaa
gagctaaagattgaaatacaaaatcaataa
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