Mucilaginibacter empetricola: HDF24_10105
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Entry
HDF24_10105 CDS
T11619
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
memp Mucilaginibacter empetricola
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
RNA_ligase
HHH
F55H2_N
Zn_ribbon_NUD
DUF3837
Ubiq-assoc
Motif
Other DBs
NCBI-ProteinID:
XPY87462
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Position
complement(2190749..2192767)
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AA seq
672 aa
AA seq
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MSPAEAKTRIESLSSELKQHNYNYYVLAMPTIADFDFDKKLEELISLEKQFPEFADPDSP
AQKVGGFITKEFVTVRHKWPMLSLGNTYNEQELLDFDQRIRKAIGDNFEYVCELKFDGLS
MSLTYEEGKLVRAVTRGDGIQGDDVTTNVRTINTIPKRLHLGNYPDHFEIRGEVFMHLKA
FERLNAERVENGEPPYANPRNFASGTIKMQDSGEVAKRPLDCFLYFLYTDKVLFKTHWES
LQAVKEWGFHVNEHSRLCSDINGVFEFIKQWDKKRFDLSYDIDGIVIKVNSYAQQQELGF
TAKSPRWAIAYKYKAEQAETELLSVSYQVGRTGTVTPVANLQPVQLAGTTVKRATLHNAD
EIEKRLKLHEGDWVYVEKGGEIIPKITSVNLDKRKPGAEPVLYRTTCPACGTTLERKEGE
AAFYCPNEDGCPPQIVGKMQHFIDRKAMNVDGLGDETIETLYQKEFIHRISDIYDLHLHS
DELKKLGRFGEKSINNMLEGIEKSKQMPFDKVLFGLGIRYVGATVAKKLAVHFKNINNLA
AASLEELVAAEEIGERIAYSITSYFADEQHKAEIAKLMAQGLQFETEEREVTLVSENLSG
KTFIISGVFEKYSRDELKDMIEQNGGKIVSSISAKLNYLVAGDNMGPAKLEKAQKLNIPI
ISDDELLTMIGF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgccgaagctaaaacccggatcgaatccctttcatcagaactaaaacagcat
aattacaattattatgtactggccatgcctaccattgccgattttgattttgataaaaaa
ctggaagaattaatttctctcgaaaagcagttcccagaatttgctgatccagattcgcct
gcgcaaaaggtgggcggttttatcaccaaagagtttgttaccgtgcgtcataaatggcca
atgctctcattaggcaatacctataacgaacaggaactgcttgattttgaccagcgcatc
cgtaaagctattggcgacaactttgaatatgtttgtgagcttaagttcgatggactctcg
atgagccttacttatgaagaaggcaaactggtaagagccgtaacccgtggcgatggtatt
cagggcgatgatgtaactaccaatgtacgtaccatcaataccatacctaaacgactacat
ctgggtaattaccctgatcactttgaaatacggggtgaggtttttatgcatttaaaagca
tttgagcgccttaacgccgaacgcgtggaaaatggcgagccaccttatgccaaccctcgt
aatttcgcctcaggcactattaaaatgcaggactcgggtgaagtagcgaaacgtccgttg
gattgtttcctttatttcttatataccgataaagtattatttaaaacccactgggaaagc
ctgcaagctgtaaaagaatggggcttccatgtaaatgaacatagccgcctctgtagcgac
atcaatggtgtttttgagtttattaaacaatgggacaaaaagcgtttcgatttgagttat
gatattgacggaattgtaataaaggtaaatagctacgcccagcagcaggaactaggtttt
actgccaaatcgcctaggtgggccattgcctataaatataaagcagagcaggccgaaaca
gagttgcttagtgtgagctaccaggttggccgcactggcactgttacacctgtagcaaat
ttacaacccgtacaactagccggaactaccgtaaaacgtgccacgctacataatgccgat
gaaatagaaaaacgccttaaactgcacgaaggtgattgggtgtacgttgaaaaaggtggc
gaaattatccccaaaataaccagtgttaatttagataaacgcaagcctggggccgaacct
gtactttaccgtaccacctgccctgcctgcggaactactcttgagcgtaaagaaggcgaa
gcagccttttattgccctaatgaagatggttgcccgccacaaattgtgggtaaaatgcag
cactttatcgatcgtaaggcaatgaatgttgatggcctgggagatgaaaccattgaaaca
ctttatcaaaaagaatttattcatcgcatcagtgatatttatgacctgcatctgcacagc
gacgaattaaaaaagttggggcgctttggcgaaaaatcaatcaataacatgctggagggt
atcgaaaaatcaaagcaaatgccttttgacaaggtattgtttggtttaggtatccgttat
gtaggtgcaacagtagctaaaaagctggctgtacattttaaaaacattaataaccttgct
gccgcgagtctggaagaactggttgccgccgaagaaattggcgaacgcattgcctacagc
ataaccagctattttgcagatgaacaacataaagccgaaattgcgaaactgatggcacag
ggcctgcagtttgaaacggaagaaagagaagtaacccttgtcagcgaaaacctgagtggc
aaaactttcattatatcgggcgtatttgaaaaatattcccgggatgagcttaaggatatg
attgagcagaatggcggtaaaatagtaagcagtatttcggccaagctaaattatttggta
gccggcgataatatgggtcccgccaaactggaaaaagctcagaaactgaatatccccatt
attagtgatgacgaattactaacgatgatagggttttaa
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