Candidatus Moranella endobia PCIT: MEPCIT_028
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Entry
MEPCIT_028 CDS
T01562
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
men
Candidatus Moranella endobia PCIT
Pathway
men03420
Nucleotide excision repair
men03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
men00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MEPCIT_028 (uvrD)
03430 Mismatch repair
MEPCIT_028 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
men03400
]
MEPCIT_028 (uvrD)
Enzymes [BR:
men01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MEPCIT_028 (uvrD)
DNA repair and recombination proteins [BR:
men03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MEPCIT_028 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MEPCIT_028 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AEI74695
UniProt:
F7XX69
LinkDB
All DBs
Position
31527..33692
Genome browser
AA seq
721 aa
AA seq
DB search
MYVYDLLNHLNDKQREAVTAPRGNLLVLAGAGSGKTRVLVHRIAWLLLVEHCLPSSIMAV
TFTNKAAAEMRHRIEQLVGTKQCGMWLGTFHGLANRLLHTHHQDANLPNDFHIIDSEDQL
RLLKRLIKTMNLDEKKWSPRQAMWYICGKKDQGIRPYNVKIYGNQIEQTWQIIYHTYQEA
CDHAGIVDFAELLLRAYELLLNKPHILQQYRDRFTNILVDEFQDTNKIQYAWIQRLAGNN
CSVMIVGDDDQSIYGWRGAKVENINRFLENFPDAKIMRLEQNYRSTCNILQAANVLISQN
GNRLGKNLWTKSLKGELISLYCAFNELDEARFVVNSIKVSQEQGGALKDCAILYRSNAQS
RVLEEALLQTGLPYSIYGGMRFFERQEIKDGLAYLRLINNRNNDAAYERVVNTPPRGIGD
RTLDLVRKTARNQQLTLWQSSRHLIDERVLTGRASAALLQFLNLIDTLAAETAELPLHVQ
TDTVIKNSRIWSMYEHEKGEKGQARIENLKELVTATRQFQYNYEEQNVLPLQAFLSHAAI
DTMDEQASFCKDAVQLMTLHSSKGLEFKQVFIIGMEEGMFPSPMSLEEDRLEEERRLAYV
GVTRAMKKLTITYAVTRRMYGKTVYHRPSRFIGELPQACVKKACLHASGIKSTTRYQRIS
TVLSKNNSSFTIGQLVRHPTFGEGKVVNMEGSGEHSRLQIAFPDYGIKWLVASYAQLEHF
M
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtttatgatttactcaaccatttaaacgataagcaacgtgaagcagtgacagca
cctcgcggtaatttactagtgctggcaggagcaggtagtggtaaaactagagtactagtg
caccgaatagcttggctattattagttgaacattgtttaccatcttctataatggccgta
acatttaccaacaaggcggcagcagaaatgcgccatcgtatcgaacagttagtaggtact
aagcagtgtggcatgtggcttggtacttttcatggactagccaaccgcttactacatact
caccatcaggatgctaatttaccaaatgattttcatattatagatagtgaggatcagctg
cgcttgttgaaacgtctaataaaaactatgaatttagatgagaaaaaatggtcgccgcgc
caggcaatgtggtacatctgtggcaaaaaagatcaaggtatacgaccgtataatgttaaa
atttatggtaaccaaatagagcagacctggcaaattatatatcacacctatcaggaagcg
tgtgaccacgccgggatagtagattttgccgagcttctactgcgtgcttatgaacttttg
ctaaataaaccacatattttgcagcaatatcgcgatcgtttcaccaatatcctagtagat
gaattccaagataccaacaaaattcaatacgcttggattcaacggctagccggtaataac
tgcagtgtaatgatcgtcggtgacgatgatcagtcaatttacggctggcgtggggcaaaa
gtggaaaatattaatcgttttctagaaaattttcctgatgctaagatcatgcgtttagaa
cagaattaccgttctacttgtaatattttacaagctgccaatgtactaatttcccaaaac
ggaaaccgtcttggcaaaaatctatggaccaaaagcctaaaaggtgagcttatttctctt
tattgtgcctttaacgaactagatgaggcacgttttgtggtgaatagcatcaaggtaagc
caggagcaaggaggagcactcaaagattgcgctattctatatcgtagcaacgcccagtca
cgcgtactagaagaagctttgctgcaaactggcctaccttacagtatttatggtggtatg
cgctttttcgagcgtcaagaaattaaagacggactagcctatttacggctcattaacaat
cgcaacaacgacgcagcctatgaacgagtcgttaatactccaccgcgcggcatcggcgat
cgtaccctcgatttagtgcgcaaaaccgcacgcaaccagcagctaacattatggcagtca
agtcggcatctaatagacgagcgcgtattgactggtcgcgcttctgcggcactactgcaa
tttttgaatcttatagatacgctagcggcagaaacagcagaattaccactgcatgtgcaa
accgatacagtcattaaaaattcacgtatttggagcatgtacgagcatgaaaaaggcgaa
aaaggccaggcacgtattgaaaacttaaaagaactagtaactgctacccgtcagttccaa
tataactatgaagagcagaatgtattaccattacaggcattcctttctcatgcagcaatt
gataccatggatgagcaagcatccttttgcaaggatgctgtgcaattaatgacattacat
tcctctaaaggtctggaatttaaacaggtattcattattggcatggaagaaggtatgttt
cccagtccaatgtcactggaagaagacagattagaggaagagcgccggttagcatacgtt
ggtgtaacccgcgcaatgaaaaaattaacaataacctatgctgtaaccagacgtatgtat
ggcaaaactgtatatcatcgtccgtcacgttttattggcgaactaccacaggcttgcgta
aaaaaagcatgtttgcacgcaagcggcataaaaagtacgactagatatcagcgtattagt
acggtactaagtaaaaacaacagtagttttaccataggccagctggtgcgtcatcctacc
ttcggcgagggcaaggtggttaatatggaaggaagcggtgagcatagccggctgcagata
gcgtttccagactatggaatcaaatggttggtagcatcttacgctcagctagaacacttt
atgtaa
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