Candidatus Moranella endobia PCIT: MEPCIT_042
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Entry
MEPCIT_042 CDS
T01562
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
men
Candidatus Moranella endobia PCIT
Pathway
men03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
men00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEPCIT_042 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
men03021
]
MEPCIT_042 (rho)
03019 Messenger RNA biogenesis [BR:
men03019
]
MEPCIT_042 (rho)
Transcription machinery [BR:
men03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MEPCIT_042 (rho)
Messenger RNA biogenesis [BR:
men03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MEPCIT_042 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEI74707
UniProt:
F7XX81
LinkDB
All DBs
Position
48423..49682
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELVTIGDNIGLENLARLRKQDIIFTILKQHAKSGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDGERYFALLKVNKVN
YEKPENARNKILFENLTPLHTNSRLCMERGNGSTEDLTTRVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSIAYNYSDCVLMVLLIDERPEEVTEMQRLVNGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVMILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTKEELQKMWILRKIIHPMSEIDAMEFLINKLVMTKTNEEFFDMMKCS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaccgaattaaaaaatacgccagtttcagaactagttactattggcgataat
ataggactggaaaacctggcccgcctgcgtaaacaagacatcatctttaccatccttaag
cagcatgccaagagtggtgaagatatcttcggcgatggtgtactggaaattttgcaggac
ggattcggctttcttcgctctagcgacagttcataccttgcaggtccagatgatatttac
gtttctcctagccaaattcgccgttttaacctgcgtaccggggacacaatttccggcaag
attcgtccaccgaaagatggagaacgctactttgcactactaaaagttaacaaagtaaac
tacgaaaaaccggaaaatgcccgtaacaaaattctgtttgaaaacctaacaccactgcac
accaattcgcgcttatgcatggagcgtggtaatggctcgactgaagatctaactacgcgc
gttcttgatctagcatcacctattggccgcggtcagcgaggcctgattgtagcgccaccg
aaagctggtaaaacaattctactacaaaatatagctcaaagtatcgcttataattattcc
gactgcgtgttaatggtactgctgattgatgagcgtccggaagaagtgacagagatgcag
cgtctggtgaacggtgaagtcatagcgtctacatttgatgagccagcttctcgtcacgta
caggtagcagagatggttatagaaaaagcaaagcgtctggttgagcataaaaaagacgtt
atgatattgttagattcaattacccggctcgcgcgcgcctacaacaccgttgtaccagct
tcaggcaaggtattaaccggtggtgtcgacgccaacgccctgcatcgtccgaagcgtttc
tttggtgctgcgcgtaatatggaagaaggcggtagtctgactattattgcaactgctctt
atcgatactggctcgaagatggacgaagtgatttacgaagaatttaaaggaacaggtaac
atggaattacatttatcacggaaaatagctgagaaacgagtttttccagcaatcgattac
aaccgctctggtactcgtaaggaagaattactaacaaccaaggaagagctacagaaaatg
tggatactacgtaaaattattcatccaatgagtgaaattgatgcgatggaatttctgatt
aacaagttggttatgaccaaaaccaatgaggaatttttcgatatgatgaaatgttcgtaa
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