Candidatus Moranella endobia PCIT: MEPCIT_129
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Entry
MEPCIT_129 CDS
T01562
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
men
Candidatus Moranella endobia PCIT
Pathway
men03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
men00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MEPCIT_129 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
men03400
]
MEPCIT_129 (recB)
Enzymes [BR:
men01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MEPCIT_129 (recB)
DNA repair and recombination proteins [BR:
men03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MEPCIT_129 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
AAA_25
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEI74787
UniProt:
F7XXG1
LinkDB
All DBs
Position
complement(148859..152401)
Genome browser
AA seq
1180 aa
AA seq
DB search
MIFDSFNPLTLPLQGTRLIEASAGTGKTYNLTVLYLRLLLGLGGETAYPRPLSVEEILVV
TFTDTATKELRSRIRANIHLLMLACMRGESNDSLLAAILVQISDRRLAALHLLAAERQMD
NATIYTIHSFCKHILNNAVTSNILFPQTFLDDESCLYQQVSAEFWRSHCHKLPLEVARMV
QQYWEGPANLLAELLPYLQGELPMVCNPPDITESILARHARIIAVIADLKQQWRTSALEL
MTLLESHKLDRRIYSSNNLRTWLAKIDYWVSEPTVDDQVPNELARFKSSVLEEQTTDGEP
PRHELFAAVEAFYQSRLSLRELIFFMALIEIRQALKQEKQRRNEIGFDDLLSRLDQALAG
GSSGAALAESVRKRYPVAIIDEFQDTDPQQYRIFRQIYVGQSNCGMLLMGDPKQAIYAFR
GADIFTYMCARNEVDAHYTLDTNWRSSPGMINAVNHLFQSLPSPFIFSDIPFLPVMPATV
NQTLRLVVQHQPQPALRIWLQPGAGVGISEYKQYMARQCAATIQDLLCAACEGKAWLEGR
LGKQQLIQASDITVLVRNRSEAALVYAALAELLIPAVQLSNRDSVFNTPEARELQWILQA
VLTTEKKNELRRALATCLLGLNATAIDTLNNDERLWNKMVEDFAGYRQHWQKHGILPMLR
KIMVKFCIAESLLASQGGERRLTNLLHLGELLQEASTQIVDNEFALVRWLALQVASPNSQ
ETNQQLRLENDRHLVQIMTVHKSKGLEFPLVFLPFAADFRVQKRPMFHDRDKYGAWLDLS
AAKDSLLLAEEERLAEDVRLLYVALTRSIYHCSIGIAPLYRGSRKKSGISDLHLSALGYL
VQQGQDGNVEHLHERLADLVARASGDIFLCDSLTWPAVTKLKLTPTPTPLLQARSWPAPP
KDIWSWKVTSGMQLYGSSSIIESQPRLDVDALGEKQEERKEELLQLTPHTFPRGAVSGTF
LHGLFKNIDFNRPLDQQYLSDVLTQKGIKAIWLPVIMHWIKSIITIPLDGYSLSLNQLTP
ASRYAELSFYLPIDAVVQAHKLDRICKRYDPLSARCPPLDFLQFRGMLKGYIDLVFRWQG
RYYLLEYKSNWLGEDIDAYTRPAIEQAMITHRYVLQYQLYALALHRFLGQRLLDYNYQRD
FGGIYYLFMRGIDLAQPENGLFYCRPDIVLVEELNNLFIG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgatagctttaatcccctaacgttaccgctgcagggcactcgtttgatcgaa
gcgtcggcaggaactggtaaaacttataacctgactgttctatacttacgactactactt
gggctgggcggcgagactgcgtatccacggccattgagcgtggaagaaatattggttgtt
acctttaccgatactgcaacaaaagagctacgcagtcgtattcgcgcaaatatacatttg
ctgatgctagcttgtatgcgcggtgaaagcaatgattcgctactagctgctatactggta
caaatcagcgaccggcggctagctgcattacatctgctggcagcggagaggcagatggac
aatgcaacgatttataccatccatagcttctgcaaacacatactaaacaacgcggtcact
tctaacatactatttccgcaaactttcctggatgatgaatcttgcttgtatcagcaggta
agcgctgaattctggcgaagccattgccataagttgccactggaagtagcgcgcatggtg
caacaatactgggaagggccggcaaacctactagctgaattactgccttatttacagggt
gaattgcccatggtatgtaatccgccagatataactgagtctatcctagctaggcatgct
cggattattgctgttattgcagacctaaaacagcaatggcgtacgtctgcgttagagctt
atgacgctactagagagccataaactagaccgtcggatatacagcagcaataatctacgg
acctggctggcaaaaattgattactgggtgagtgagccgaccgtggatgatcaggtaccg
aatgaattggcgcggtttaaaagctcagtgctggaggaacaaaccaccgacggagaaccc
cctcggcatgagttatttgctgctgtggaggctttttatcagtccaggctctcgcttcgt
gagctaatttttttcatggcgttaattgaaatccgccaggcattaaaacaagaaaaacaa
cgtcggaatgaaataggattcgacgatttactgagccgcctggatcaggcgttggctggt
ggtagtagcggtgccgctctagctgaatcagtacgcaagcgctatccggtagcgataatc
gacgagtttcaggatactgacccacagcagtaccgaatttttcgtcaaatttacgttggt
caatctaactgtggaatgttgttgatgggtgacccgaaacaggctatctatgcgtttcgc
ggagctgatatttttacttatatgtgcgctaggaatgaagttgatgctcactataccctt
gatactaactggcgttcgtcgcctgggatgataaatgcagttaatcatttgttccaaagc
ttgccgtcgccgtttatcttcagcgatattccatttttaccagtgatgcctgctactgtc
aatcaaacattgcgtttggtagtgcagcatcagccacagccagcgctgcgtatttggcta
cagccgggcgccggcgttggcataagtgaatataaacaatacatggcgcgccagtgtgcc
gctactattcaagatttgctatgcgctgcctgtgaaggcaaagcctggcttgaagggcga
ctgggtaagcagcagctaatacaagcatcggatattactgtgctagtacgcaaccgcagc
gaggcggcactggtgtatgctgcactagcggaactgctgattccagcagtgcaactctcc
aaccgtgacagtgtcttcaatacacccgaggcgcgcgaactgcaatggatcttgcaggca
gtgttgacgacagagaaaaagaatgagctgcgccgggcactggctacctgcctgctcggg
ttaaatgctaccgctattgatacattgaataacgatgagcgtctgtggaataaaatggtt
gaagattttgctggttatcgtcagcactggcaaaaacatggcatattgccgatgctgcgt
aaaataatggtaaaattttgcatcgctgaaagcttattagccagccaggggggcgaacgc
cgcctaactaacttactccatctaggtgaactattacaggaagcatctacgcaaatagta
gataatgaattcgcgctagtccgttggttagcgctacaggttgcatcccctaattcacag
gaaactaatcagcaattgcggctggaaaacgatcgtcatctggtacaaatcatgacagtg
cataaatctaaaggtttggagttcccgcttgtgttcttgccattcgcagctgatttccgc
gttcaaaaacgaccgatgtttcacgatcgagataagtacggggcctggttggatcttagc
gctgctaaagatagtttacttttagctgaagaggagcgattagcagaagatgtgcgtctt
ctttatgtagcgctaacgcgctctatttaccattgtagtatcggcatagcgccactgtat
cgcggtagtcgcaaaaaatctggtatcagcgatctgcatttgagcgcgcttggctaccta
gttcaacagggtcaggatggcaatgtggagcatcttcacgaacgactggcggatttagtg
gcgcgcgctagcggcgatatttttttgtgtgactcgttgacttggccagctgttactaaa
ctaaaactcacgccaacgccaacgcccctactgcaagcccgcagctggcctgcgccgcca
aaagatatctggtcctggaaggtaacctcaggtatgcagctatatggcagttcgtcaata
attgagtcgcagccgaggttagatgtggatgccttgggtgagaagcaagaagagcgaaag
gaagaactgttacagttgacaccacatacttttcctcgtggcgctgtttctgggacattt
ttacacggattatttaaaaatatagattttaaccggcctttggaccaacagtatctgagt
gatgttctgacgcagaaaggcatcaaagcaatttggctgccagtgatcatgcactggata
aaaagcattatcactataccgttagatggttattcactttcgctcaatcaactcacaccg
gctagccgctatgctgaattatcgttttatcttccaatagatgctgtcgtgcaggcgcac
aagttggaccggatctgcaagcgttatgatcctctttctgcccgctgtccaccgctagat
tttctgcagttcaggggtatgctcaaagggtatatagatcttgtgtttcgctggcaaggt
cgttattacctgcttgaatataaatcaaattggttaggtgaggatatcgatgcttacact
agaccagcaattgaacaggcaatgattacccatcgctatgtactgcagtatcaactttat
gcgcttgctttgcatcggtttttgggccaacgcttattggattataattaccagcgtgat
tttggcgggatatattacctatttatgcgcggtatagacttagcacaaccggaaaacggg
ctgttctattgccggccggacattgttttagtcgaggaacttaataatttatttattggc
taa
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