Candidatus Moranella endobia PCIT: MEPCIT_133
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Entry
MEPCIT_133 CDS
T01562
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
men
Candidatus Moranella endobia PCIT
Pathway
men03030
DNA replication
men03430
Mismatch repair
men03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
men00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MEPCIT_133 (holA)
03430 Mismatch repair
MEPCIT_133 (holA)
03440 Homologous recombination
MEPCIT_133 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
men03032
]
MEPCIT_133 (holA)
03400 DNA repair and recombination proteins [BR:
men03400
]
MEPCIT_133 (holA)
Enzymes [BR:
men01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MEPCIT_133 (holA)
DNA replication proteins [BR:
men03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MEPCIT_133 (holA)
DNA repair and recombination proteins [BR:
men03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MEPCIT_133 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AEI74790
UniProt:
F7XXG4
LinkDB
All DBs
Position
complement(156521..157537)
Genome browser
AA seq
338 aa
AA seq
DB search
MIRLYADQLGAQLQDSLCSCYLLFGNDQFLLRESQECIRNQAKSKQFNEHFRVTLDASTD
WSFIFSLCQTRSMFANRQMLLFFLPDGVIPANMGKNMLQLASLLHDDLLLILRGSKWTST
LENSTWFKALSPHAVLVSCTTPAQRQLPGWVVKRATSMKMKLDNAACQLLCYCYEGNLLA
LDQALAQLSLMYPDGSMTLSRVEAVVNDAAHFQPFQLIDAVLSGKSKRAVHILCQLKLEA
VDPTILVRMFQRLVLQSLTMKGKLQGANISNLCQNSQLLLTPQLELKRLTMLQLRDAVAL
MTKIELELKHNYDYPVWSELNALVLLLCGNKLPAAMCC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccgactatatgccgatcagttaggcgcgcagttacaagattcattatgctcctgt
tatttgctgttcggcaacgatcagtttcttttgcgagaaagccaggaatgtattcgcaac
caagcaaaatcaaaacaatttaacgaacattttcgcgtcacattggatgccagtactgac
tggagtttcattttcagcttatgccaaacacgcagtatgttcgccaaccgtcagatgctg
ttatttttcttgccagatggcgtcattccagccaacatgggaaaaaatatgcttcagttg
gcttctttgctacatgatgatctcttgttaatcctgcgcggcagcaagtggaccagcacc
ttggaaaacagcacctggtttaaagcacttagcccacacgcagtactggttagctgcacc
actccagcacagagacagctgcctggctgggtggttaagcgagcaaccagtatgaagatg
aagcttgataatgctgcttgccaactactatgctattgctatgaaggcaacctgctggcg
ctggaccaagcgctagcccagttatcactaatgtatccagacgggagtatgacgctgtcg
cgggtcgaagctgtggttaacgacgctgcacactttcaaccgtttcaattaatcgacgct
gttttgtcaggcaaaagtaaacgtgctgtgcacattttatgtcagctaaaactagaagca
gtggatcccaccatcttggtacgcatgtttcagcgcttagtactacagtcgttaacaatg
aaaggcaaattgcaaggcgctaacatcagcaatttatgccaaaatagccaactactgcta
acgccgcagttagagttaaagcggcttactatgttgcagttgcgagacgcggtagcgttg
atgaccaagattgaattggaacttaagcataattatgattatcctgtttggtctgagtta
aatgcattggtgctgctattatgcggtaataagctaccagcggcgatgtgctgctag
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