Candidatus Moranella endobia PCIT: MEPCIT_293
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Entry
MEPCIT_293 CDS
T01562
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
men
Candidatus Moranella endobia PCIT
Brite
KEGG Orthology (KO) [BR:
men00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
men03032
]
MEPCIT_293 (topA)
03400 DNA repair and recombination proteins [BR:
men03400
]
MEPCIT_293 (topA)
Enzymes [BR:
men01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MEPCIT_293 (topA)
DNA replication proteins [BR:
men03032
]
Prokaryotic type
DNA Topoisomerases
MEPCIT_293 (topA)
DNA repair and recombination proteins [BR:
men03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MEPCIT_293 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
SH3DP
Toprim_4
SepF
DUF1877
Motif
Other DBs
NCBI-ProteinID:
AEI74929
UniProt:
F7XXV3
LinkDB
All DBs
Position
349830..352424
Genome browser
AA seq
864 aa
AA seq
DB search
MGTALVIVESPAKAKTINKYLGKGYVVKSSVGHIRDLPKKSPASKNKNNTCIPDQHTVLI
KRMGIDPFHSWKARYEILPGKEKLVTELRALAEEADHVYLATDLDREGEAIAWHLREAIG
GDEKRFRRVVFNEITRNAVTQAFENPVVLNMNRVNAQQARRFMDRIVGYMVSPLLWKKIA
RGLSAGRVQSVAVRLVVEREREIKSFMPAEYWELHVALQTSQAAQLMMKVTHQQEKPFKP
AKQQQLQAAISILEHTDYIVSNRDDKITTSKPGSPFTTSTLQQAASLHLGYRVKKTMLLA
QRLYEAGHITYMRTDSTHLSRNALNMARCYISAAFGHSYLPTQPKEYVSKNNSQEAHEAI
RPSDVSALAEQLNNMEAEAQKLYQLIWRQFVACQMKPAQYNYTILTVNAGEFQLSAHGRQ
LMFDGWTKVMPTQHTEKDKRTLPTVKEGNNLTLNKILPSQHFTKPPARYSEASLVKELEK
RGIGRPSTYVSIISTIQERGYVHADNRRFYAEKIGEIVTDRLEENFSELMSYDFTAKMEA
TLDQVATNQQDWKSVLDAFFSKFSQQLKNAEQNPVDGGMRLNQMIMTSINCLVCDRPMGI
RTASTGVFLGCSGYQLPPKDRCKNTIHLIPESETLNRFTVGDEETNALRARRRCVKCRTA
MDNYVIDSKRKIHVCGKNPLCDGYNIEQGEFIVVAYNGRVVECEKCGFNMQLKFGRFGKY
IACTNNNCKNTRKILRNGDVAPPKEDPVLLPELPCYGHSDAYFVLREGAVGVFLAANTFP
KYRETRKPLVAELARFRERLPVKLQYLADAPIEDDEGNSTLVRFSRKTKQQYISSEKDGK
ATGWTAFYVNGKWQVNRKSSGCGP
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcccttgttattgttgaatcgccagccaaagctaagacaattaataaatat
ttgggcaagggctacgtagttaagtcaagcgttggtcatattcgcgatttgcctaagaaa
agtcccgcaagtaaaaataaaaataatacgtgtatacctgaccagcatactgtgctaata
aaacggatgggaattgatcctttccatagttggaaagcaaggtatgaaattttacccggt
aaagaaaagttggtgactgagttaagagctttggcggaagaagccgatcacgtttatctc
gcaactgatcttgaccgcgaaggggaggcgattgcctggcatttacgcgaagctatcggt
ggtgatgagaaacgttttagacgggtggtgttcaatgaaattacccgcaacgctgtcaca
caggcttttgaaaatccggtagtactgaatatgaaccgggtcaatgcccaacaggcgagg
cggtttatggaccgcatcgttggatatatggtatcgccactactgtggaaaaaaatagcg
cggggcctatctgctggaagggtccaatcagtggcagtgagactagtagtagagcgtgag
cgtgaaataaaatcgtttatgccggcagagtattgggaactacatgtcgctctgcagacg
tcacaagccgcacaattaatgatgaaagtgacacatcagcaggaaaaaccatttaaaccg
gcaaagcaacagcaacttcaggcagcaatctctatactagaacatacggattatatagtt
agcaaccgtgacgataaaattactaccagtaaaccagggtcacctttcacaacgtcgacg
ctccagcaggcagccagccttcacctaggatatagggtgaagaaaaccatgttactggcg
caaagactgtatgaagccggacatattacctatatgcgtactgactccactcatttaagt
cgaaatgcgcttaacatggcacgctgctatatcagcgccgctttcggccattcctatctg
ccaacacagcccaaagaatatgtcagtaaaaataattcccaggaagctcatgaggcgata
cgtccatcagacgtcagtgcccttgcggagcagttgaacaacatggaagcagaagcacag
aaactatatcagttgatctggcgtcaatttgtcgcctgtcaaatgaagccggcgcaatat
aattacacaatactaactgtgaacgctggtgaatttcagctcagcgcccacggtcgtcag
ctaatgtttgatggttggaccaaagttatgccgacacagcatactgagaaagacaagcgt
actttgccaactgtgaaagaaggtaacaatcttacactgaacaaaattctacccagtcaa
catttcactaagcctcccgcccggtacagcgaagcttcgttggtgaaagaactggaaaaa
cgtggtatcggtcggccgtcaacctatgtttcgataatatcgacgattcaagagcgcggc
tatgtccacgctgacaatcgtcgtttttatgcggaaaagataggggaaattgtcaccgat
cgtctagaagagaacttcagtgagctgatgagttatgattttaccgccaaaatggaagcg
acactcgatcaggtggctactaatcagcaggattggaaaagcgtactagacgcttttttt
tccaaatttagccagcagcttaaaaacgctgagcaaaatccggtagacggaggcatgcgg
ctcaatcagatgattatgactagcatcaattgtcttgtctgtgaccgcccgatggggatc
cgtacagccagtactggtgtattcttgggctgttcaggctaccagctacccccgaaagat
cgctgcaaaaatactattcatcttatccctgaatcagaaaccttgaataggtttactgta
ggtgatgaagaaaccaatgcactacgcgcacgccgccgctgcgtaaaatgccgcaccgct
atggacaactatgtcatcgatagtaagcgcaaaatccacgtatgcggtaaaaatccgctg
tgtgacggctataatatagaacagggtgagtttatagtcgtggcctataatggccgagta
gtagaatgtgaaaaatgtggcttcaacatgcaattgaaatttggacgttttggtaaatac
atagcttgtactaacaacaactgtaagaatacccgcaagatcctgcgtaacggagatgta
gcgccgccgaaggaagatccagtgctgctgcctgagctgccttgctacgggcattcggac
gcgtactttgtgctgcgtgaaggagcagttggagtatttttggctgctaatacgtttcca
aaataccgtgagacccgcaaaccattagtagcagaactagctcgtttccgcgaacgctta
ccagtaaagctgcaatatctagctgatgctcccatagaggatgacgagggtaatagcacc
ttagtacgctttagccgcaaaacgaaacaacaatatatctcctcggaaaaggatggtaag
gctacaggctggacagcgttctatgttaacggtaaatggcaggtgaatagaaaatcatcc
ggttgcggtccttag
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