Candidatus Moranella endobia PCIT: MEPCIT_310
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Entry
MEPCIT_310 CDS
T01562
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
men
Candidatus Moranella endobia PCIT
Pathway
men03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
men00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEPCIT_310 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
men03019
]
MEPCIT_310 (pnp)
03016 Transfer RNA biogenesis [BR:
men03016
]
MEPCIT_310 (pnp)
Enzymes [BR:
men01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MEPCIT_310 (pnp)
Messenger RNA biogenesis [BR:
men03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MEPCIT_310 (pnp)
Transfer RNA biogenesis [BR:
men03016
]
Prokaryotic type
tRNA degradation factors
MEPCIT_310 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
aRib
CsrA
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AEI74944
UniProt:
F7XXW8
LinkDB
All DBs
Position
369628..371739
Genome browser
AA seq
703 aa
AA seq
DB search
MKKEIILLTPLVHKFQYGQHTVTLETGIMARQATAAVMVSMDDTAVLVTVVGAKDAKIGQ
SYFPLTVNYQERTYAAGRFPGGFFRREGRPSEGETLIARLIDRPIRPLFPAGFLNEVQVI
ATVVSGNPQVSPDIVAMIGVSAVLSLSGIPFSGPIGAARVGYINDQYVLNPTQAELATSR
LDLVVAGTENAVLMVESEAQLLSEEQMLGAIVYGHNQQQVVIENIHQLVTLAGKPKWPYN
MPDVDVALQERVTELAEARLSDAYYITQKQERYAMLDAIKADVVEELTSKDDNINQNTIR
DILGTLEKNVVRSRILRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTA
TLGTERNAQNIDELTGERIERFLLHYNFPPYCVGEIGVVGAPKRREIGHGRLAKRGVMAV
MPNASEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLIKEKDN
FMVLSDILSDEDHLGDMDFKVAGSREGITALQMDIKIEGINSEIMQVALNQAKSARMHIL
DVMELAISSPRGDISEFAPRIHTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGT
VKVSSNDSNKARAAICRIEEITSEIEVNRVYNGKVTRIVDFGAFVALVGGKEGLVHISQI
ANKRIDKVNDYLELGQEVHVKVLEVDRQGRVRLSIKEASITTN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaggaaattattttgttaactccacttgtacataagtttcaatatggtcagcat
accgtaaccctggaaacaggtataatggctcgtcaggcaactgctgcagtaatggttagc
atggacgacacagcagtcttagtaacggttgttggtgccaaagatgcaaaaataggacaa
agttacttcccgttgaccgttaactatcaggagcgaacttacgccgcaggacgctttcca
ggcggttttttccgacgtgaaggccgcccgagcgaaggcgaaaccctaattgcgcgccta
atagaccgtccaatacgtccgctattcccggcaggttttcttaacgaagtacaagttata
gccacggtggtatcaggcaatccacaagttagcccagatatagtggcaatgattggggtt
tccgccgtgcttagtttatctggtattccttttagtggacctattggcgccgcgcgagtt
ggttacattaacgaccagtatgtgcttaaccctacccaggctgaactggcaacaagtcga
ctagatttggtggttgctgggacagagaatgcggtactgatggtagaatccgaagcgcag
ctgttaagtgaagagcaaatgctaggcgcaatagtatacggacataatcagcagcaggta
gtgattgagaatatacatcaactagtaaccttagcaggtaaaccaaagtggccatataat
atgcccgacgttgatgtcgctctgcaggagcgagtaacagagctggcagaagcccgttta
agcgatgcttattacattactcagaagcaagaacgttatgccatgttggatgctattaag
gccgatgtcgtagaagagctgacaagcaaggacgacaatataaatcaaaataccattaga
gacatcctgggtacgttggagaaaaatgtggtgcgtagtcgcatactacgcggtgaaccg
cgtattgatggccgtgagaaagatatgattcgcggtctggacgtgcgcacaggagtattg
ccacgtacccatgggtcggcgctgttcacccgcggggaaacccaggcgttagtcactgca
actctaggtactgagcgcaacgcgcagaatatcgatgaattgactggtgaacgtatagaa
aggttcctgttacactacaattttccaccttactgcgtcggtgaaattggcgtggtaggt
gcaccaaagcgccgtgaaataggccacggccggctggctaaacgtggtgttatggctgtg
atgccaaacgctagcgagttcccttacaccgtacgcgtagtatcggaaataacggaatct
aacggctcatcatccatggcttctgtgtgcggcgcttcactagcactgatggatgctggg
gttccaattaaggcagcagtggccggtattgccatgggactgataaaagaaaaagataat
ttcatggtgttatcagatattctgagtgatgaagatcatctaggcgatatggatttcaaa
gttgctggcagccgtgaaggaattactgcactacagatggatattaaaattgaaggcata
aacagcgaaatcatgcaggtggcgctgaatcaagctaagagcgcgcgcatgcatattctt
gacgtcatggagctggcaatcagctcgccacgtggtgatatttctgaatttgcgcctcgc
attcatactattaaaatcagttccgataaaatcaaggatgtaattggtaaaggcggttct
gttatccgcgcgctaaccgaagaaactggcactacgatagaaattgaagatgacggtacc
gtgaaagtctcatccaacgacagtaataaagcccgcgcagcaatttgccgcattgaagag
attacctcggaaattgaagttaaccgtgtttataacggtaaagtcacccgtatcgttgac
ttcggtgcatttgttgccctcgttggtggtaaagaagggttggtgcatatctcccagatt
gctaataaacgtatagataaagtaaatgattatctggaacttggccaggaagtgcatgtt
aaggtgctggaagtggaccgtcaaggtcgcgtgcgcctcagcatcaaggaagctagtatc
accaccaactag
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