Candidatus Moranella endobia PCIT: MEPCIT_311
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Entry
MEPCIT_311 CDS
T01562
Symbol
priA
Name
(GenBank) putative primosomal protein N'
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
men
Candidatus Moranella endobia PCIT
Pathway
men03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
men00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MEPCIT_311 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
men03019
]
MEPCIT_311 (priA)
03009 Ribosome biogenesis [BR:
men03009
]
MEPCIT_311 (priA)
Enzymes [BR:
men01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MEPCIT_311 (priA)
Messenger RNA biogenesis [BR:
men03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MEPCIT_311 (priA)
Ribosome biogenesis [BR:
men03009
]
Prokaryotic type
rRNA helicases
MEPCIT_311 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
ThylakoidFormat
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEI74945
UniProt:
F7XXW9
LinkDB
All DBs
Position
372205..373992
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AA seq
595 aa
AA seq
DB search
MSTITTFFTDLGLKSSILQALTDLGYEKPSPIQAACIPPMLAGRDILGMAQTGSGKTAAF
SLPLLHNINPELAAPQVLVLAPTRELAIQVGSACADFAKHMKGVSIVALYGGQRYDVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLDLSNLSGLVIDEADEMLRMGFIEDVEKILTQVPEQ
HQTALFSATMPEAIRRITRRFMNDPQEVRIQSSITTRPDISQSYWTVHGIRKNEALVRFL
EVEDFDAAIIFVRTKTATLEVAEVLERSGYNSAALNGDMNQTLREQTLERLKDGRLDILI
ATDVAARGLDVDRISLVVNYDIPLDSDSYIHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERIMMLTIPAVELPTAEVLSTRRLSKFTAKVQNQLASRDLDLYRSLLTKLQPAEEIDMET
LAAILLKMAQCERPLILPPDSLIERRPRREFLKRNERQENDERLSRQRRNSGDRGEMDLY
RIEVGRDDGVEVRHIVGAIATEGDINSRYIGNIKLFASYSTIELPKGMTGEMLSNFTRTR
IMNKPIKMQFIGAAWSRSCDDRRKFISSESRFSRGSKRPEYRGARLTDDSKLRRK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaataacaactttttttactgatctggggctaaaatcttctatacttcaagcc
ctgaccgatctaggttatgaaaagccgtcacctatccaggccgcctgtattccgcctatg
ttggccggacgtgacatccttggtatggcgcagaccggcagcggtaaaactgcggccttt
tctctgccgctgttacacaatattaatcccgaactagccgcaccacaggtgctagtacta
gcgcctactagagaactggcgatacaagttgggtcagcctgcgccgatttcgccaaacat
atgaaaggtgttagtatagtagccctgtacggcggtcagcgttatgatgtccagttgcgc
gcgttgcgtcaagggccgcaagttgtggtcggcactcctggccgcctactagaccatttg
aaacgcggtactctggatctatctaatttgagtggactagtaatcgacgaagcagatgag
atgttgcgcatgggctttatcgaagacgtagaaaaaattttgacacaggtaccagagcaa
caccagaccgcgctgttctctgcgaccatgccggaagcaattcgccgtattactcgccgt
tttatgaacgatccgcaggaagtgcgtattcaatccagtattactacacgtccggatatc
agccagagctattggacagttcatggtatacgcaagaatgaagctctggtacgtttctta
gaagtagaagattttgatgctgccattatattcgtacgcacaaaaaccgccacactggaa
gtagcagaagtgttagagcgtagcggttataatagtgctgccctaaacggtgacatgaat
cagacactacgcgagcaaacattagaacgtttaaaggatggtcgcttggatattctgatt
gcaacagatgtcgccgctcgcggcctagacgttgatcgcatcagcctagtcgtgaactac
gatattccgctggattccgattcttacatacaccgtattggtcgtaccggtcgtgccggc
cgcgccggccgggcgctattattcgtggaaaatcgagagcgccgtctgctacgcaatatc
gaacgcattatgatgctgaccatacctgcggtagaactaccaaccgctgaggtattgagt
acacgtcgtttgtctaagtttactgctaaggtacaaaatcagctggcaagtagagatctt
gatctgtaccgctcactgctaaccaaactacaaccggcagaagaaattgatatggaaacg
ctagcagctattctgttaaaaatggcccaatgtgaacgcccactgatcctgccccctgat
tcgttgattgaacgacgcccacgccgcgagttcctgaagcgcaacgagcggcaggagaac
gacgaacgtttatcgcggcagcgtcgtaacagcggcgacagaggtgagatggatctctac
cgtatcgaggtaggtcgtgatgatggtgtcgaagtacgccatatagttggcgccatcgcc
accgaaggtgacattaatagccgctatataggcaatattaaattattcgcctcctattct
acaattgagttgcctaaaggtatgacaggagaaatgctatctaactttacccgcacgcgt
attatgaataaaccgattaaaatgcagtttataggtgccgcatggtcgcgcagctgtgat
gatcgccgaaagttcattagcagcgaaagccggtttagtcgtggcagtaagcgcccagaa
taccgcggcgcaaggttaacagacgacagtaaattaagaagaaagtaa
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