Methanoplanus endosymbiosus: L6E24_01610
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Entry
L6E24_01610 CDS
T08358
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mend
Methanoplanus endosymbiosus
Pathway
mend03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mend00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L6E24_01610 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mend03021
]
L6E24_01610 (rpoB)
Enzymes [BR:
mend01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L6E24_01610 (rpoB)
Transcription machinery [BR:
mend03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
L6E24_01610 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_RPAB4
Auto_anti-p27
DUF6487
Motif
Other DBs
NCBI-ProteinID:
UUX92850
UniProt:
A0A9E7TKP6
LinkDB
All DBs
Position
408298..410127
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AA seq
609 aa
AA seq
DB search
MSTAVTKKSRVFVDGALIGLCDGPEELVNNVRKMRRHGELSNEINISYKDFNGDIIIHTD
RGRARRPLIVAEGGKPLMTNEDLDVLREGKCDFLDFIEKGLIEFIDAEEEEDLLIAINEE
DLTPEHTHLEIDPALILGIGAAHVPFPEHNASPRVTMGAGMVKQALGFGASNMKLRPDTR
GHQLHYVQKPLVHTQTSQVIGSDDRAAGQNLVVAVLSYEGFNIEDSLIYNRAAIDRGVGR
SHFFRTYDGEERRYPGGQLDKIEVPDEEVSGSRGPEYYQNLDSDGVINPETEVHEKDILI
GKTSPPRFLEEPSGELIAVEKRRDTSVTMRSNECGIVDTVIVTEGENSSHLVKVRTRDLR
VPEVGDKFASRHGQKGVVGLIVPPVDMPFTEGGIAPDLVINPHAIPSRMTVGHMLEMIGG
KVGSLEGRRIDATAFSGEPEAKIRKSLKVLGFSHNGREVMYDGITGRQFKADIYIGVIYY
QKLYHMVSSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVMIGHGAAMALKERLL
DESDKVEQYVCAKCGMIAFLDKNRNVTRCLACGNETDIYSVEMSYAFKLLLDEMKSMCIA
PRMHLEDQV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcagttactaaaaaatcaagggttttcgtggacggtgctcttatcggcctt
tgtgacggacctgaagaacttgtaaacaatgtcaggaagatgagacgtcatggtgaactc
tccaatgaaataaatatttcatataaagatttcaatggcgacatcattatccacactgac
cgtggaagagcaagaagacctcttattgtcgctgagggcggaaaacccctgatgacaaat
gaggatctcgatgttctcagggaaggaaaatgcgattttcttgattttattgagaaagga
cttattgaattcattgatgcagaagaagaggaagatctgttaattgcaattaatgaagaa
gatctgactcccgaacatacacatcttgagattgatcctgctctgattcttggaatcggt
gcagcgcatgttccgttccctgaacacaatgcatctccgcgtgtcacaatgggtgccgga
atggtcaagcaggcccttggttttggcgcttcaaatatgaaactccgtccggatacccgt
gggcatcagctgcattatgttcagaaacctcttgtgcacacgcagacctcccaggttatt
ggatctgatgatcgtgcagccggacagaatcttgttgttgctgttctttcgtacgaaggt
ttcaatattgaggattcactcatatacaaccgcgctgcaatagatcgtggtgtgggacgc
tctcatttcttcaggacatatgatggtgaagagaggcgctacccaggtggtcagctcgat
aaaatagaagttcctgacgaagaagtatcaggatcacgcggacctgaatattatcagaac
ttagactctgatggtgtaattaatcctgaaactgaagttcatgagaaggatatccttatt
ggaaagacatcccctccaagattccttgaagaaccaagcggagaattaattgctgttgag
aagaggcgtgacacatctgtcacaatgagaagcaatgagtgcggcattgttgataccgtc
attgtaaccgaaggtgaaaattcatcccaccttgttaaagtaaggacaagggacttacgt
gtccctgaagtcggtgataagttcgcatcaaggcacggtcagaaaggtgttgtcggactc
attgttcctccggttgacatgccctttacagaaggtggcattgctcctgatcttgtcatc
aaccctcacgcaattccttcacgtatgactgtcggacatatgcttgagatgattggtgga
aaggttggttcacttgaaggccgcagaattgatgcaactgctttcagcggcgaacctgag
gctaagattcgtaaatccctaaaagttctgggcttttcacacaatggccgtgaagtcatg
tatgacggaattacaggccgtcagttcaaggcagatatttacatcggtgtgatttattac
cagaagctgtaccatatggtttcgtcaaagatgcatgcacgttcaagaggtcctgttcag
gttcttacccgccagccgacagaaggtcgtgcacgtgagggaggtctgagattcggagag
atggagcgtgatgttatgataggacacggcgctgcaatggctcttaaagagcgcctctta
gatgaatctgacaaggttgaacagtacgtctgtgcaaaatgcggaatgattgcattcctt
gacaaaaaccgcaatgtgacaagatgtcttgcatgtggcaatgagacagacatatattct
gttgaaatgagttacgcattcaaacttctgctggatgagatgaagagtatgtgcatagct
ccaaggatgcatcttgaggatcaggtataa
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