Methanoplanus endosymbiosus: L6E24_02660
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Entry
L6E24_02660 CDS
T08358
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mend
Methanoplanus endosymbiosus
Brite
KEGG Orthology (KO) [BR:
mend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mend03016
]
L6E24_02660
Enzymes [BR:
mend01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
L6E24_02660
Transfer RNA biogenesis [BR:
mend03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L6E24_02660
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
Motif
Other DBs
NCBI-ProteinID:
UUX93834
UniProt:
A0A9E7PRJ2
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All DBs
Position
complement(643734..645212)
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AA seq
492 aa
AA seq
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MKQRHRPDLKAIARDAMKSYGFAPRFPDQVIRESENISGRIFPDNVTEAADLRHLLWSSI
DNFDSKDLDQIEFCEEKDGGIINVKVAIADVDCYVPKDSATDRYAAYNTTAVYTGVETFF
MIPFKLCGNISSLLPGKDCQAVVAEYDILPDGDIEHVGVYRAVVSNKAKLIYEEVGNWIE
KKGSIPDDVGSIPGLKDQILLQHKASLRLRKFRMQNGALDLETAEARPVMRGNDVSDIIS
MKQNEAHRIIEEFMVAANRTFAGFLMDAGVPMTHRVVKIPEKWDLICEVVAGYGVTLPDS
PDSKALTEFLAGQRVSDPKTFPDLSLTIVKLLGHGEYVPYNPGDAPVGHFALAVPDYTHS
TAPNRRYNDLIIQRIVKSVLDGKKVPYTPGELERLSVRMTDRDKASQKVERFMLKSAAAV
LLSKSIGKVFDAIVTGASGRGTYVRIYDPPVEGRVMEGYEGLYVGRKVKVSLLMTDAYRG
YIDFECLRKGRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagagacatcgtccggatttaaaggcaattgcccgtgatgctatgaaatcatat
ggttttgcaccgcgttttcctgatcaggtcatccgcgagagtgagaacatctccgggaga
atatttcctgataatgtaacagaggcagcagatttaaggcatcttctctggtcatcaatt
gataatttcgattctaaggatctggatcagatcgaattctgtgaggagaaggatggcggc
attatcaatgtgaaggtggccattgccgatgttgactgttacgttcctaaagattcagca
acagatcgctatgctgcatacaatactacggctgtctataccggagttgagacctttttt
atgatcccgtttaagctttgcggcaatatatcgtcccttcttccgggtaaagactgtcag
gctgtggtcgctgaatatgatattttaccggacggtgatattgagcatgtgggtgtgtac
agggctgttgtatccaataaggcaaaactcatctatgaggaggttggtaactggattgag
aagaagggcagtattcctgatgacgttggcagtattccgggtttaaaagatcagatcctg
cttcagcataaggcatcccttcgcctcagaaaattccggatgcaaaacggcgctcttgat
cttgaaacagccgaggcacgtccggttatgcggggtaatgatgtgtctgatataatatca
atgaagcagaatgaagcacacagaatcattgaggagtttatggttgctgccaaccggaca
tttgccggatttctgatggatgccggtgtgcctatgacgcacagggttgttaagattccg
gagaagtgggaccttatctgtgaggttgttgccggatatggcgtaaccctgcctgacagt
ccggattcaaaggctctgactgagttcttagccggacaaagagtttcagatcccaaaacc
ttccctgatctctcactgactattgttaaacttcttgggcatggtgaatatgtaccatac
aatccgggagatgctcctgtcggacattttgcacttgcagttccggattacacccacagt
acagctcctaaccggaggtataacgacctgattattcagagaattgtaaagtcggttctt
gacggaaagaaggttccttatacaccgggtgaacttgagaggctttctgtccgtatgacg
gacagggacaaggcatcacagaaggttgagcgttttatgctaaagtctgctgctgctgtt
cttctctccaaaagtataggcaaggtctttgatgctattgttacgggtgcttccgggaga
ggaacttatgtcagaatttatgacccgcctgttgaaggaagggttatggaggggtatgag
gggctttatgtcggccggaaggtaaaagtctcccttttaatgactgatgcctatcgtggt
tatatcgactttgaatgtctccggaagggcaggagataa
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