Methanoplanus endosymbiosus: L6E24_02675
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Entry
L6E24_02675 CDS
T08358
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mend
Methanoplanus endosymbiosus
Pathway
mend04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mend00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
L6E24_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mend03019
]
L6E24_02675
03009 Ribosome biogenesis [BR:
mend03009
]
L6E24_02675
04131 Membrane trafficking [BR:
mend04131
]
L6E24_02675
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mend04147
]
L6E24_02675
Messenger RNA biogenesis [BR:
mend03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
L6E24_02675
Ribosome biogenesis [BR:
mend03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
L6E24_02675
Membrane trafficking [BR:
mend04131
]
SNARE
SNARE associated proteins
Others
L6E24_02675
Autophagy
Aggrephagy
Other aggrephagy associated proteins
L6E24_02675
Exosome [BR:
mend04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L6E24_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
TIP49
AAA_2
AAA_14
AAA_33
AAA_22
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_7
IstB_IS21
NPHP3_N
DUF5906
AAA_17
Parvo_NS1
Sigma54_activat
CDC48_2
Zeta_toxin
SLFN-g3_helicase
AAA_18
AAA_3
AAA_11
PhoH
bpMoxR
NB-ARC
AAA_19
AAA_24
DUF815
ATPase
ATPase_2
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
UUX93042
UniProt:
A0A9E7THJ3
LinkDB
All DBs
Position
647068..649152
Genome browser
AA seq
694 aa
AA seq
DB search
MKVTIKEARPRDVGRAIARINQEIMAELGLNTGDIVNIKGGRSAYARTLPAYPEDGMDGS
IQIDGIIRTNIKSGINETVTLERTEIPPLDMAVLKPLESTSGKDIDCSLLSGYPLQKDDM
VRLAVFGRQITFHIEDAHPDAGVVNENTIIRIRGQTSKEPEKKRGFTSYEDIGGLRPQLQ
KIREMAELPLRYPELFEKVGIDPPKGVLLYGPPGTGKTLIAKAVANEVNAHFIYISGPEI
MGKYYGESEGKLREIFSEAKKNAPAVIFIDEIDSIAPKREELGGEKQVEKRVVAQLLALM
DGAQKRGQVMVIAATNMPNLLDPALRRPGRFDREIEIAIPDRDGRQEIFEIHMRGMPIED
DVAIEEIASATHGYVGADIAALCREAAMCALRKILPEIDFSQDYIPYSILSGLVITNDDI
NSAMLEVRPSALREVFIERPDVKWSDVGGLSEIKEKIKNLVELPVKRPGLYRYAGVNPPK
GIMMHGPPGTGKTLIARAVAGKTGSNFISVKGPEIFSKYLGESEKTIREIFRKARMAAPC
IIFFDEIDAIAPARSAGEANGNADRVISQLLIEMDGIEELKGVIVLAATNRPDIIDSALM
RPGRFDFVLELPLPDEDARTEILTIHLKNKPLAGNISINSLAGRTEGFSGAELEFICKNA
AHLAIKEFAGGDDELDNLIIRESHLDSALSEIRK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttactattaaagaggcacgtccgcgtgacgttggaagagccatagcccgtata
aatcaggaaataatggcagaactgggtctgaacacgggggacatcgttaatattaaagga
ggacgctctgcctatgccaggacacttcctgcatatccggaagacgggatggacggcagc
attcagatagacggcataatcaggaccaacataaaatcaggaatcaatgagaccgtcact
cttgaaagaacagaaataccgcctcttgacatggcagtactaaaaccacttgaatcaaca
tccggaaaagacattgactgtagccttctttcaggatacccgcttcagaaggatgacatg
gtaagacttgctgtttttggaaggcagatcacatttcatattgaggatgcccatccggac
gcaggagtggttaatgaaaataccataatcagaatcagagggcagacatctaaagaaccg
gaaaaaaaacgcggtttcacatcatatgaagatataggcggtttaaggccgcagctgcaa
aagatcagggagatggcagaactcccactcagatatccggaactctttgaaaaggtgggc
atagatccgccaaaaggtgttcttctctacggccctccgggaacaggcaaaaccctgatt
gcaaaagcggttgcaaacgaagtcaatgcccatttcatctatatatccggccctgaaatc
atgggtaaatattacggtgaatccgaaggtaaactcagggagatcttttcagaagcaaag
aaaaatgctccggctgtaatttttattgacgaaattgacagtatagcgcctaaaagagag
gaacttggcggggaaaaacaggtagagaagagagttgtggctcagcttctcgcattgatg
gacggagcacagaagagagggcaggttatggtaatagccgcaacaaacatgccaaacctt
ctcgacccggccctcagaagacccggaagatttgaccgtgagattgagatagcaatacct
gacagagacgggcgacaggaaatatttgaaatacatatgagaggcatgccaatagaggac
gatgtcgcaatagaagagatcgcctcagccacacacggatatgtcggtgcagatatagca
gcactgtgccgtgaggctgcaatgtgtgcactcagaaaaattctgcctgagattgacttt
tcacaggattatattccatacagtattctctccggacttgtaatcacaaatgatgacata
aattcagcaatgcttgaagtcaggccttctgcccttcgcgaggtatttattgagaggcct
gatgtaaaatggagcgatgtaggcgggctttcggagataaaggagaaaataaaaaacctg
gttgaacttccggttaagaggcccggattataccgttatgcaggagttaatcctccgaaa
ggcataatgatgcacggccctcccggtacaggaaagacccttattgccagagcagttgca
ggaaaaacagggtcaaatttcatatctgtaaaagggccggagatattctcaaaatatctc
ggcgaatctgaaaaaacaatcagggaaatattcagaaaggccagaatggctgcgccgtgc
ataattttcttcgatgaaattgatgccattgcaccggcaagaagtgcaggtgaggccaat
gggaatgcagaccgggttatttctcagctcctcatagagatggacggcattgaagagtta
aaaggagtaattgttcttgcagccacaaaccggcccgatattatagactctgctctcatg
cgtccgggaagatttgactttgtactggaactgcctctgccggacgaagatgcaagaact
gaaattctaacaatacaccttaagaataagcctttagccggcaatatatctattaattct
ctggccggccggacagaaggattttcaggtgcagaactggagttcatatgcaaaaatgct
gctcaccttgcaattaaagaatttgcaggcggtgatgatgaattggacaatctaataatc
cgggaatctcatttagactctgcattaagcgagataagaaaataa
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