KEGG   Methanoplanus endosymbiosus: L6E24_04340
Entry
L6E24_04340       CDS       T08358                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
mend  Methanoplanus endosymbiosus
Pathway
mend03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mend00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    L6E24_04340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mend03021]
    L6E24_04340
Transcription machinery [BR:mend03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     L6E24_04340
 Prokaryotic type
  Archaeal type
    TFB
     L6E24_04340
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Sigma70_r4 Cas12f1-like_TNB Ribosomal_S27e Zn_ribbon_SprT HTH_AsnC-type Lar_restr_allev FtrD-like RPA_interact_C LUC7 Zn_ribbon_LysW DUF5817 UPF0253 A2L_zn_ribbon Zn_ribbon_double Zn_ribbon_Elf1 Zn_ribbon_IS1595 Stc1 FYDLN_acid Zn_ribbon_8 Zn_ribbon_16 DZR
Other DBs
NCBI-ProteinID: UUX93362
UniProt: A0A9E7PQ36
LinkDB
Position
complement(1027838..1028845)
AA seq 335 aa
MQELEKLKQLQSQREALKNRSTTVEKVKNKHESSTKTVCPECGSRQLVQDYERAELTCQN
CGLVLEEEFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRAIS
SKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDAVD
KNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLKLL
PTSPIDYVPRFCSGLNLKGEVQSRAVEILRQAGEKELTSGRGPTGVAAAAIYISSILGGE
RRTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgcaggaacttgaaaaacttaaacaactccagagccagagagaggcacttaagaacaga
tcaactacggttgagaaggtaaagaataagcatgagagttccacaaagactgtctgtcct
gagtgcggaagccggcagcttgtgcaggattatgaacgtgctgaacttacctgtcagaac
tgtggtcttgttcttgaagaggagtttattgaccggggtcctgagtggcgtgccttcgat
catgatcagaggatgaagcgttcacgtgtcggtgcaccgatgacctttactatccacgat
aagggtctctccacaatgattgactggagaaaccgtgactcctacggccgtgctatctct
tcaaagaaccgtgcacagctctaccgtctgcgtaaatggcagaggaggattcgtgtatca
aatgctacggagagaaaccttgcatttgcactgtcagaacttgaccgtatggcatctgct
cttggtcttccaaggaatgtccgtgagactgcggctgttgtctatcgtgatgcggttgac
aagaatctcattcgcggaaggagtattgagggtgttgcagcagctgcactgtatgcagcc
tgccgccagtgcaatgtcccgcgaacacttgatgagattgctgaggtatcccgtgtctca
agaaaggagataggaaggacatacaggttcatctcaagggaactcggattaaaacttctg
cctacatcacctattgattatgtgccgcgtttctgttcaggtctgaatcttaagggtgag
gttcagtcaagggcagttgagattctcaggcaggccggtgagaaggagcttaccagcgga
agagggcctacaggtgtcgctgccgctgctatctatatctcttcaattcttggcggagaa
cgcagaacccagcgtgaggttgccgaggttgccggtgtgactgaggttactatcaggaac
agatacaaagaacttgcagagaagcttgacattgagattattctgtga

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