Methanoplanus endosymbiosus: L6E24_04765
Help
Entry
L6E24_04765 CDS
T08358
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
mend
Methanoplanus endosymbiosus
Brite
KEGG Orthology (KO) [BR:
mend00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
L6E24_04765 (tnpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
D5_N
UPF0489
Bep_C_terminal
zf-piccolo
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UUX93441
UniProt:
A0A9E7PR73
LinkDB
All DBs
Position
complement(1143216..1144349)
Genome browser
AA seq
377 aa
AA seq
DB search
MKSNQIYMLRAYKYRIYPNKEQEKMFFQHFGACRFIYNWGLENKIRTYETDGKSISRFAL
QKMLPDLKSEHDWIKDVNSQSIQSALLNLENAFTRFFREKKGFPKFKSRKNPVQSFSVPQ
HYIVNFDTHKIKLPKIGWVKAKLHRKYEGAEKTATVSVTSTGKFFISILIDDGQEQLPVQ
HFDADTTVGIDVGIKDFAILSNGEKIENPRYLKQSLLRLKVLQKRLSRKQKGSNNRNKAK
NAVAKIHEKIHNQRSDFQHKLSFRLVCENQAIALETLNVEGMLKNHKLAQHIADASWSSF
VTQLEYKAQKHGKTILRIGQFEPSTKICSECGYYNRDLTLSDRDWICPDCGVHHDRDINA
AINIRKFAFDKQNLIGI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcaaaccaaatctatatgttgagggcctacaaataccgaatctatcctaacaaa
gaacaggagaaaatgttctttcagcatttcggtgcctgtaggtttatctacaattggggt
ctggaaaataaaatccgaacttatgaaacagatggaaaatcaatatcgagatttgcatta
caaaaaatgctacctgatttgaaatcagagcatgattggataaaagatgttaattcgcaa
tcaatacagagtgcattgttaaatcttgaaaatgcatttactcgtttcttccgggaaaag
aaaggatttccaaaattcaaatcccggaaaaatccagtgcagtcattttcagttccacaa
cactacattgtgaattttgatacccataaaattaaattacctaaaattggatgggttaaa
gcaaaattacacaggaaatatgagggagctgaaaaaacagcaactgtgtcagtcacatca
acgggcaaattttttattagtattctgatagatgatggacaggaacaacttcctgtacaa
cattttgatgcagatacaactgtgggtattgatgtaggtatcaaagattttgcaatactc
tccaatggtgaaaagattgagaatccccgatatttgaagcagtcacttctccgactgaaa
gtgttacaaaaacgattgagtagaaaacaaaaaggttctaacaacagaaataaagcaaaa
aatgcagtagcaaaaattcatgaaaaaattcacaatcaaagaagcgatttccagcacaaa
ctctcttttagattagtatgcgagaaccaagcaattgcactggaaactttgaatgttgaa
gggatgttaaaaaatcataaattggcacaacatattgctgatgcatcatggagttcattt
gttactcaattagaatataaggcacagaaacacggtaaaactatcttacggataggacaa
tttgaaccatctacaaaaatctgtagtgaatgtggatattacaacagggatttgacttta
tctgatagagactggatttgtccggattgtggggtacatcatgaccgggatataaatgcc
gcaataaatatcaggaaatttgcttttgataaacagaatctaattggaatataa
DBGET
integrated database retrieval system
