Mycetohabitans endofungorum: IHE33_01500
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Entry
IHE33_01500 CDS
T11976
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
menf Mycetohabitans endofungorum
Pathway
menf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
menf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IHE33_01500 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
menf03021
]
IHE33_01500 (rpoA)
03400 DNA repair and recombination proteins [BR:
menf03400
]
IHE33_01500 (rpoA)
Enzymes [BR:
menf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IHE33_01500 (rpoA)
Transcription machinery [BR:
menf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IHE33_01500 (rpoA)
DNA repair and recombination proteins [BR:
menf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IHE33_01500 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
WHD_CHMP7
Motif
Other DBs
NCBI-ProteinID:
WXK22200
LinkDB
All DBs
Position
303642..304619
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVDSLGDNHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIEVPHDCEV
INPEHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGDESAKVIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTETTAETP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcatcgcagtggattcgcttggcgacaaccac
gcgaaagtggtcatggaaccgtttgaacgcggttatggccacaccttgggcaatgcgctc
cggcgtgttttgctatcgtcgatgatcggctatgcgccgaccgaggtgacgatcgccggc
gtcgttcacgagtattcgacgctcgacggtgtgcaagaggacgtggtcaacctgctgttg
aacctcaagggcgtggtgttcaagctgcacaaccgcgatgaagtgaccgtcacgctgcgc
aaggaaggcgaaggtgtggtgaccgccggtgacatcgaggtgccgcacgactgtgaggtc
atcaatccggagcacgttatcgcccatctatctaagggcggcaagctcgacgtgcagatc
aaggtcgaaaaggggcgtggctatgtgccgggcaacgtgcgccgctatggcgacgaaagc
gctaaggtcatcggccgcatcgtgctcgacgcgtcgttctcgccggttcgccgggttagc
tacgcggtcgagagtgcacgggtcgagcagcgtaccgatctggacaagctcgtgatgaac
atcgagaccaatggcgtgatttcgccggaggaagcgattcgtcaatcggctcgtattctg
gtcgaccagttgtctgtgttcgcggcgctggaaggcaccgaaacgacggctgaaacgccg
tcgcgtgcgccgcagatcgatccgatcctgctgcgtccggttgacgatctcgagctgacg
gtccgatccgcgaactgtctgaaggccgagaacatctactacatcggcgacctgatccag
cgtaccgagaacgagctgctgaagacgccgaacctgggccgcaagtcgttgaacgagatc
aaggaagtgctcgcttcgcgtggcttgacgctcggcatgaagctggagaattggccgccg
gccggcctcgacaagtaa
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