Methylobacterium sp. NI91: GU700_04705
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Entry
GU700_04705 CDS
T10782
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
meni Methylobacterium sp. NI91
Pathway
meni03030
DNA replication
meni03430
Mismatch repair
meni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GU700_04705 (dnaE)
03430 Mismatch repair
GU700_04705 (dnaE)
03440 Homologous recombination
GU700_04705 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meni03032
]
GU700_04705 (dnaE)
03400 DNA repair and recombination proteins [BR:
meni03400
]
GU700_04705 (dnaE)
Enzymes [BR:
meni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GU700_04705 (dnaE)
DNA replication proteins [BR:
meni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GU700_04705 (dnaE)
DNA repair and recombination proteins [BR:
meni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GU700_04705 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QIJ78841
LinkDB
All DBs
Position
complement(1032463..1035981)
Genome browser
AA seq
1172 aa
AA seq
DB search
MATLKEVGFVHLHVHSSYSLLEGGVKVADLVKAAAADRQPALALTDTNNLFGALEFSEKA
AGTGIQPIAGLQLTVCFEAPDPMARMPQAGCANIVLLAQDETGYGNLLRLGSRAHFDGPL
GAAPNLAVSALEGNVDGLIGLTGGLTGPLDTSLRAGRADQAARRLEVLKEAFGEERLYVE
IQRHGLDDGPAVERELLRLADGNGLGIVATNEPFFAKPGDYDAHDALLAIADGRLVSDER
RRRLTPRHAFTTRAAMMELFRDLPDALAASVEIAMRCAVRARTRKPILPNFASVAAGEAP
PMAEALAEAADAPVQAVAADEPTELCRQAEAGLELRLKQHGTAPGFTEEDYRARLKFELD
VIVKMKFPGYFLIVSDFIKWAKDHDIPVGPGRGSGAGSLVAWSLLITDLDPLRFGLLFER
FLNPERVSMPDFDIDFCVEGRERVIRYVQQRYGERQVGQIITFGTLLARGVLRDVGRVLE
MPYGQVDKLTKLVPQNPANPVTLAQAIEGEPKLQQAIEEEPIVARLIEISKKLEGLHRHA
STHAAGVVIGDRPLEELVPLYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTMLRCC
TDLLKQRGIEVDLAQIPLDDPKTYEPMGRGETVAVFQVESAGMRKALCEMQADRLEDIIA
LVALYRPGPMANIPVYCERKLGRDAGNEASWYPHPMLEPILRETFGIIVYQEQVMEVAKV
LAGYTLGEADMLRRAMGKKIKAEMDAQRDRFVKGCLESGIPQAKANEIFDLLAKFADYGF
NKSHAAAYALVTYQTAYLKANHPVEFLAAAMTLDIDNTDKLAEFRQDAQRLKITVEPPSV
NTSGVVFDVKEGRILYALAAIKGVGRSAVESIVQARGDKPFKDLACFARRLNPRHVNKRT
LENLIAAGALDCIEPDRARAWAAVEPMMKMAQGAAEAETSGITDMFGGVASADVALRIPP
HEFWTHTDKLKRECDAIGFFLSGHPLDEYGPILQKLRVQSWADFCRAVRSGTASVGRIAA
SVLDRSERRTKSGNKLGIVILSDQTGHFEAIIFSEGLNQYRDILEPGQPLVLTIQANLEG
EDVRARITTAEPLDQAAARHQKGMRIFLRDDRALSSVQQRLTLRGEGEVSLILILDGGER
EVEVRLKDRYQATPQVAGALRAVPGVVQVEVN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctcaaagaagtcggtttcgtccacctccacgttcattcgtcctactcgctg
ctcgaaggcggcgtgaaggtcgccgacctcgtgaaggcggccgccgccgaccggcagccc
gcgctggcgctcaccgacaccaacaacctgttcggcgcgctggaattctcggagaaggct
gcgggcaccggcatccagccgatcgcgggccttcagctcacggtctgtttcgaagcgccc
gacccgatggcgcgcatgccgcaggccggttgcgcgaacatcgtgctgctcgcccaggac
gagaccggctacggcaacctgctgcggctcggcagccgggcccatttcgacggcccgctc
ggcgccgcccccaacctcgccgtctcggcgctcgaggggaatgtcgatgggctgatcggg
ctgaccggcggcctcacagggccgctcgacaccagcctgcgcgccggccgcgccgatcag
gcggcgcggcgcttggaggtgctgaaggaggcgttcggcgaggagcgcctctacgtcgag
atccagcgccacggcctcgatgacggcccggccgtcgagcgtgagctgctgcggctcgcc
gacggcaacggcctcggcatcgtcgccaccaatgagccgttcttcgccaagcccggcgat
tacgacgcccacgacgccctgctcgccattgcggacggccgactcgtctccgacgagcgc
cgccgccggctgacgccgcgccacgccttcaccacgcgcgccgcgatgatggagctgttc
cgcgatcttccggacgcgctcgcggcctccgtcgagatcgccatgcgctgcgccgttcgg
gcgcgcacccgcaaacccatcctgccgaatttcgccagcgtcgccgcgggcgaggccccg
cccatggccgaggccctggccgaggcggccgacgcaccggtccaggcggtcgccgccgac
gagccgacggagctgtgccgtcaggccgaggccgggctggagctacgcctgaagcagcac
ggcaccgcgccgggtttcacggaagaggattaccgcgcacggctgaagttcgagctcgac
gtcatcgtcaagatgaagttcccgggctacttcctgatcgtctccgacttcatcaagtgg
gccaaggaccacgacattcccgtcggtcccggccgcggctccggcgcgggctcgctggtg
gcgtggtcgctcctcatcaccgaccttgatccccttcgcttcggcctgctgttcgagcgc
ttcctcaaccccgagcgcgtctcgatgccggacttcgacatcgacttctgcgtcgagggc
cgcgagcgcgtgatccgctacgtgcagcagcgctacggcgagcggcaggtcgggcagatc
atcaccttcggcaccctgctcgcccgcggcgtgctgcgtgacgtcggccgcgtgctggag
atgccctacgggcaggtcgacaagctgaccaagctcgtgccgcagaacccggccaacccc
gtgaccctggcgcaagccatcgagggcgagcccaagctgcagcaggcgatcgaggaggag
ccgatcgtcgctcgcctcatcgagatctcgaagaagctggagggcctgcaccgccacgcc
tcgacccacgccgccggcgtggtgatcggcgaccgccccctcgaagaactggtgccgctc
taccgagacccgaagacgggtatgcgggtgacccagttcaacatgaagtgggtcgagcag
gccggcctcgtcaaattcgacttcctggggctcaagaccctcaccatgctgcggtgctgc
accgacttgctgaagcagcgcggcatcgaggtcgatctcgcccaaatcccgctcgacgac
ccgaaaacctacgagccgatggggcgcggcgagacggtggcggtgttccaggtggaatcc
gccggcatgcgcaaggcgctgtgcgagatgcaggccgaccgcttggaggacatcatcgcg
ctggtggcgctctaccggccgggcccgatggccaacatcccggtctattgcgagcgcaag
ctcgggcgcgacgccggcaacgaggcgagctggtatccgcacccgatgctggagccgatc
ctgcgggagacgttcggcatcatcgtctaccaagagcaggtgatggaggtcgcgaaggtt
ctggccggctacacgctgggcgaggccgacatgctccgccgcgccatgggcaagaagatc
aaggcggagatggacgcccagcgcgaccgcttcgtgaagggctgcctggagagtggaatc
cctcaggcgaaggccaacgagatcttcgacctcttggccaagtttgccgattacggcttc
aacaagtcgcacgcggcggcctacgcgctcgtgacctaccagaccgcctatctgaaggcg
aaccatccggtcgagttcctggccgcggccatgacgctcgacatcgacaacaccgacaag
ctcgccgaattccgccaggacgcgcagcgcctcaagatcaccgtcgagcccccttccgtg
aacacctcgggcgtcgtcttcgacgtcaaggaggggcgcatcctctacgcgctcgccgcg
atcaagggcgtcggccgctcggcggtggagtcgatcgtccaagctcgcggcgacaagccg
ttcaaggatctcgcctgcttcgcccggcgcctcaacccgcgccacgtcaacaagcgcacg
ctggagaacctgatcgcggcgggtgccctcgactgcatcgagcccgaccgggcgcgggcc
tgggccgcggtcgagccgatgatgaagatggcccaaggcgcggctgaggccgagacctcc
ggcatcaccgacatgttcggcggcgtcgcctccgccgacgtggcgcttcgcatcccgccg
cacgagttctggactcataccgacaagctcaagcgcgagtgcgacgccatcggcttcttc
ctctcgggccatccgctcgacgagtatgggccgatcctccagaagctgcgggttcagtcc
tgggcggatttctgccgggcggtgcggtcgggtacggccagtgtcgggcggatcgccgcc
tcggtgctcgaccgctccgagcggcgcaccaagagcggcaataaactcggcatcgtcatc
ctctcggaccagaccggccacttcgaggcgatcatcttctccgaggggctgaaccagtac
cgcgacatcctcgagcccggccagccgctggtgctgacgatccaggcgaaccttgagggc
gaggatgtgcgcgcccgcatcaccaccgccgagcccctcgatcaggccgcggcccgccac
cagaagggcatgcgcatcttcctgcgcgacgaccgcgccttgagttcggtccagcagcgc
ctgaccctgcgcggcgagggcgaggtctcgctgatcctgatcctcgacggcggcgagcgc
gaggtcgaggtccgcctgaaggaccgctatcaggccaccccgcaggtcgcgggcgcgctg
cgcgccgtgccgggcgtggtgcaggtcgaggtgaactga
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integrated database retrieval system
