Methylobacterium sp. NI91: GU700_04735
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Entry
GU700_04735 CDS
T10782
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
meni Methylobacterium sp. NI91
Pathway
meni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GU700_04735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meni03019
]
GU700_04735
Messenger RNA biogenesis [BR:
meni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GU700_04735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QIJ78846
LinkDB
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Position
complement(1041400..1043073)
Genome browser
AA seq
557 aa
AA seq
DB search
MTTRQDELVFVPLGGVGEIGMNAGLYGIGPERQRKWIMVDCGMGFAGEEGLPGVDLMFPD
LTFIEERKKDLLGIFITHAHEDHIGAISELWPRIKAPVYATRFAKQLLETRRLSEPGAPK
VDLREIQPGRRVTVGPFEIEFVPVAHSIPESNAVAIRTEHGLVLHTGDWKLDDTPVAGDT
TSPEAFTALGDEGILAMVCDSTNVLREGRSPSESEVSATLRKLIENAPHRVAVTTFASNV
ARIRAVAEAAQACGRQVIAVGRAMDRVIDVARECGYLDGLPDFLSADSFSHIPRDKVVCL
LTGSQGEPRAAMSRVSRHDHPAISLTAGDRVIFSSRAIPGNERDVGAIINDLIEDGIEVI
TDRTELVHVSGHPRREEMVAMYSWTRPKAVVPVHGEALHLDEHARFARSQGVESVIKARN
GAVVRLAPGTPEVVEHVRAGRLYKDGNVLIDSKDRAIPERRKLSQTGIVSVALAIDERGE
MAGDPAVDIMGLPNRGRSGEPLLDTVVDTVNRTINGLSRGKMKDSEAVEIAVDRAVRSAV
NEAWGKKPACHVQVVEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacggcaagacgaactcgtcttcgtgccgctcggcggcgtgggcgagatcggc
atgaatgcaggcctctacgggatcggacccgagcggcagcgcaaatggatcatggtcgat
tgcgggatgggcttcgccggcgaggaagggctgccgggcgtcgacctgatgttcccggac
ctcaccttcatcgaggagcgcaagaaggacctcctcggcatcttcatcacccacgcgcac
gaggaccatatcggcgcaatctcggagctgtggccgcgcatcaaggcgccggtctacgcc
acgcgcttcgccaagcagcttctggagacacgtcgtctctccgagcccggcgcgccgaag
gtcgatctgcgcgagatccagccgggtcggcgtgtcaccgtcggtccgttcgagatcgaa
ttcgtaccggtggcccactcgattcccgagtcgaacgcggtggcgatccgcaccgagcac
ggcctcgtcctgcataccggtgactggaagctcgacgacacgcctgtggccggtgacacg
acctcgccggaagccttcacggctctgggcgacgagggcatcctggcgatggtctgcgat
tccaccaacgtcctgcgcgagggccgctcgccgagcgagtccgaggtctccgcgacgctg
cgcaagctgatcgagaacgcgccgcatcgcgtggcggtgacgaccttcgcctccaacgtc
gcgcgcatccgtgccgtggccgaagccgcccaggcctgcgggcgtcaggtgatcgccgtc
gggcgcgccatggaccgggtcatcgatgtcgcccgcgaatgcggctacctcgacggattg
ccggacttcctctcggcggattccttctcgcacatcccacgcgacaaggtggtctgcctg
ctcaccggctcgcagggcgagccgcgggcggccatgtcgcgggtgtcgcgccacgaccat
ccggcgatctcgctgacggccggtgaccgggtgatcttctcctcgcgcgccattcccggc
aatgagcgcgatgtcggcgccatcatcaacgacctgatcgaggatggcatcgaggtcatc
accgaccgcaccgaactcgtccacgtctccgggcatccccgccgcgaggagatggtggcg
atgtattcctggacccggccgaaggcggtcgtgccggttcacggcgaggcgctgcatctc
gacgagcacgcgcgtttcgcccgttcgcagggcgtcgagtcggtgatcaaggcccgcaac
ggcgcggtggtccgcctcgcgccgggcacgccggaggtggtcgagcatgtccgcgccgga
cgcctctacaaggacggcaatgtcctgatcgactccaaggaccgggcgatccccgagcgg
cgtaagctctcgcagaccggcatcgtctcggtggcgctcgccatcgacgagcgcggcgag
atggccggcgatccggcggtggacatcatgggcctgcccaatcgcggccggagcggcgag
ccgttgctcgacaccgtggtggatacggtcaaccggaccatcaacggcctgtcgcgcggc
aagatgaaggactcggaggccgtggagatcgcggtcgaccgcgccgtgcgctccgccgtc
aacgaggcctggggcaagaagcccgcctgccacgtgcaggtggtggaggtgtga
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