Methylobacterium sp. NI91: GU700_08760
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Entry
GU700_08760 CDS
T10782
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
meni Methylobacterium sp. NI91
Brite
KEGG Orthology (KO) [BR:
meni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meni03032
]
GU700_08760
03400 DNA repair and recombination proteins [BR:
meni03400
]
GU700_08760
Enzymes [BR:
meni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GU700_08760
DNA replication proteins [BR:
meni03032
]
Prokaryotic type
DNA Topoisomerases
GU700_08760
DNA repair and recombination proteins [BR:
meni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GU700_08760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QIJ79566
LinkDB
All DBs
Position
1950405..1951601
Genome browser
AA seq
398 aa
AA seq
DB search
MLSEEAGAGVVDPREAARDAGLRYVDDSKPGLRRKRNGKGFRYIDPKGAAVSDPKEIARL
KSLAIPPAYTDVWICPHPNGHIQATGRDEKGRKQYRYHPRFREAREASKFHRIMAFAEAL
PGIRARIDADMGKRGLPREKVLATVVHLLETTLIRVGNDDYARSNKSYGLTTLRDPHVKI
AGSEMRFRFKGKSGKEWSVSVRDRRVAKIVKACQDLPGQELFQYLDDEGERRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFEAFDNAAKAKKNLRAAIESVAGRLGNTP
TICRKCYIHPQILDCYLEGGMLLQVKEAVEGELKSGLDALRPEEAAVLSLLRGRLERATK
AAAADPDGTAKIAPPRQTGGRKAKPTGTKRTSGGRRAA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggaggaggccggagccggcgtggtcgatccccgcgaggccgcgcgggatgcg
ggcctgcgctacgtggacgattcgaagcccggcctgcggcgcaagcgcaacggcaagggc
ttccgctacatcgatccgaaaggcgcggcggtgagcgatccgaaagaaatcgcccggctc
aaaagcctcgcgatcccgccggcctacacggatgtgtggatctgcccgcaccccaacggt
cacatccaggcgaccgggcgcgacgagaaggggcgcaagcagtaccgctaccatccccgc
ttccgcgaggcgcgggaggcctcgaagttccaccgcatcatggccttcgccgaggcgctg
ccgggcattcgcgcgcggatcgacgccgatatgggcaagcgcggcctgccgcgggaaaag
gtgctcgccaccgtggtccacttgctggagaccacgctgatccgcgtcggcaacgacgat
tacgcccgctccaacaagagctacggcctcaccaccctgcgcgatccgcacgtgaagatc
gccggttccgagatgcgtttccgcttcaagggcaagagcggcaaggaatggtcggtctcg
gtccgcgaccggcgcgtcgccaaaatcgtcaaggcctgccaggacctgcccggccaagag
ctgtttcagtatctcgacgacgagggagagcggcgcgacgtcacctcctccgacgtgaac
gcgtatttgcgcgagatcacgggcgaggatttcacggcaaaggatttccgcacctgggcc
ggtaccgtgctcgccgccctggcgctgcgggagttcgaggcgttcgacaacgcggccaag
gccaagaagaaccttcgcgcggcgatcgagtcggtggccgggcggctcggcaacacgccg
accatctgccgcaagtgctacatccacccgcagatcctcgactgctacctcgaaggcgga
atgctgctgcaggtgaaggaggcggtcgagggtgaactcaagagcggcctcgatgccctg
cgcccggaggaggcggcggtgctgagcctgctcagagggcggttggagcgggcaacgaag
gccgccgcggccgatcccgacggcacggcgaagatcgcgccgccgcgccagaccgggggc
cgcaaggcgaagccgaccggcacgaagcgcacctccggcggtcgccgggcggcgtga
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