Methylobacterium sp. NI91: GU700_11105
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Entry
GU700_11105 CDS
T10782
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
meni Methylobacterium sp. NI91
Pathway
meni03030
DNA replication
meni03410
Base excision repair
meni03420
Nucleotide excision repair
meni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GU700_11105 (polA)
03410 Base excision repair
GU700_11105 (polA)
03420 Nucleotide excision repair
GU700_11105 (polA)
03440 Homologous recombination
GU700_11105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meni03032
]
GU700_11105 (polA)
03400 DNA repair and recombination proteins [BR:
meni03400
]
GU700_11105 (polA)
Enzymes [BR:
meni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GU700_11105 (polA)
DNA replication proteins [BR:
meni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GU700_11105 (polA)
DNA repair and recombination proteins [BR:
meni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GU700_11105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GU700_11105 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
EME1-MUS81_C
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QIJ79994
LinkDB
All DBs
Position
2444210..2447350
Genome browser
AA seq
1046 aa
AA seq
DB search
MTAETQPQPDKPVGADDRVILVDGSSFIFRAYFQSINQDQKYNTRPSDGLPTGAVRLFCT
KIAQFLQDGAAGVKPTHLGIVFDKSEGSFRKELFPDYKGHRPDAPDDLKRQMPLMRDAVR
AFGLHAVELERYEADDLIATYARQAEARGAEVIIVSSDKDLMQLVSDKIRFYDFESGAKG
KPGYRPERNLDRDAIIAKWEGLTPEQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEYG
SLAQLLERAAEIKQPKRRETLLANIDQAKLSRRLVALEESVPVPVPLDELGVPQPNPEKL
VGFLKAMEFNTLTRRIAQMLHVDPEAVKPDPALLPGAQPHAYTNAAGGSDAVPFFGDDVP
VDPETAAAPERTDGAAPPEAGEVDPFADLDLPDQAPKKRGPAEPTPSTLVAARAAEAVKP
FDTSAYETISTVEQLEAWIAESYEAGVIAVDTETDALDAAKAGLVGVSLATAPGRAAYIP
LAHVKPEVKGGDLFGESGAEADASDKQPGQIAFDTALKLLKPLLEDAGTLKVGQNLKYDL
SVLHRYGIDVAPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFADVAGTGRNKVTF
DRVAIDKATAYAAEDADVTLRLWRMMKPRLVAEHRVTVYETLERPLVPVLARMERAGIAI
DRNMLSRLSGDFSQILARLEEEIQEDAGERFQVSSPKQIGDVLFGKMGLPGAKKTPSGQW
ATPATLLEELAQAGHDLPKKILNWRQLSKLKSTYTDSLQEHADRGTNRVHTSFALAATTT
GRLSSSDPNLQNIPIRTEEGRRIRRAFVAPEGKKLISADYSQIELRLLAHIADIPQLREA
FEQGLDIHAATASAMFGVPLDQMTGDLRRRAKTINFGIIYGISAFGLADRLGIGREEASA
FIKQYFERFPGIRDYIDTTKRSCREKGYVTTLFGRVCHYPQIRSNNPSERASVERQAINA
PIQGTAADIIRRAMTRMEDALEAKKLTARMLLQVHDELVFEVPDDEVEATIPVIARVMEE
APAPALSLSVPLVVEARAAGNWEEAH
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagacgcaaccgcaaccggacaagcccgtcggcgctgacgaccgggtgatc
ctcgtcgacggctcgtccttcatcttccgggcctattttcagtcgatcaatcaggaccag
aaatacaacacgcggccctccgatggcctgcccacgggggcggtgcggctgttctgcacc
aagatcgcgcagtttctccaagatggcgcggcgggcgtgaagccgacccatctcggcatc
gtcttcgacaaatccgaaggatcgttccgcaaggagctgttccccgattacaagggccac
cgccccgatgcgccggacgacctcaagcgccagatgccgctgatgcgcgatgcggtgcgc
gccttcggcctgcatgcggtggagctggagcgctacgaggcggacgacctgatcgcgacc
tacgcgcgccaagcggaggcgcggggcgccgaggtcatcatcgtgtcctccgacaaggac
ctgatgcagctcgtctcggacaagatccggttctacgacttcgaatccggcgccaaaggc
aagcccggctaccggcccgagcgcaacctcgaccgcgacgcaatcatcgccaagtgggaa
ggactgacgccggagcagatcggcgacgcgctcgcgctcatcggcgatacctcggacaac
gtaccgggcgtgccaggcatcgggctcaagacggccgccgccctgatcaaggaatacggc
agcctggcgcagcttctggagcgggccgccgagatcaagcagcccaagcgccgcgagacg
ctgctcgccaacatcgatcaggccaagctctcacgccgccttgtcgcgctcgaagagagc
gtgccggttccggtgccgctcgacgaactcggcgtgccgcagcccaacccggaaaagctc
gtcggcttcctgaaagccatggagttcaacaccctgacgcggcgcatcgcgcagatgctc
cacgtcgatcccgaggcggtgaagcccgacccggcgctgctgcccggcgcccagccccac
gcctacaccaatgcggccggcggcagcgatgcggtgccgttcttcggcgacgacgtgccg
gtcgatcccgagaccgccgccgctccggagcggaccgacggcgcggcgccgcccgaggcg
ggcgaggtcgatcccttcgccgatctcgacctgccggatcaggctccgaagaagcgcggc
cccgccgagccgacgccctcgaccctggtggccgcccgtgcggcggaggcggtgaagccg
ttcgacacgtcggcctacgagacgatttccacggtcgagcagttggaagcctggatcgcc
gagagctacgaggccggcgtcatcgcggtcgataccgagaccgacgcgctcgatgcggcc
aaggccggcctcgtcggtgtctcgctcgccaccgcgccggggcgggccgcctacatcccg
ctcgcccatgtgaagcccgaggtgaagggcggcgacctgttcggcgagagcggcgcggaa
gcggacgcctccgacaagcagcccggccagatcgcgttcgacaccgcgctcaagctgttg
aagccgctgctggaggatgcgggtacgctcaaggtcgggcagaacctgaaatacgacctc
tcggtcttgcaccgttacggcatcgacgtggcgcccttcgacgacacgatgctgatctcc
tacgtgctcgatgccggcaagggcgggcacggcatggacgaactggcccgccgccatctc
ggccatcagccgatcaccttcgcggatgtggccggcaccggccgcaacaaggtcaccttc
gaccgcgtcgcgatcgacaaggcgacggcctacgcggcggaggacgccgacgtgaccttg
cgtctgtggcggatgatgaagccgcgcctcgtcgccgagcaccgggtgaccgtctacgag
acgctggagcgcccgctggtgccggtgctggcgcggatggagcgggccggcatcgccatc
gaccgcaacatgctgagccgcctctcaggcgacttttcgcaaattctggcgcggctggag
gaggagatccaggaggacgcgggcgagcgttttcaggtctcctcgccgaagcagatcggc
gacgtcctgttcggcaagatgggcctgcccggcgccaagaagacgccgtccggccaatgg
gccacgcccgcgacgctgctcgaagaactcgcccaggccggccacgacctgccgaagaag
atcctgaactggcgccagctctccaagctgaaatcgacctacaccgactcgctgcaggag
catgccgaccgcggcaccaaccgggttcacacctccttcgcgcttgccgcgacgacgacc
ggccggctctcctcctcggatccgaacctgcagaacatcccgatccgcacggaggagggg
cgtcgcatccgccgcgccttcgtcgcgcccgagggcaagaagctgatctcggccgactat
agccagatcgagctgcgcctgctcgcccacatcgccgacatcccgcaattgcgggaggcg
ttcgagcaggggctcgacattcacgcggcgaccgcctcggcgatgttcggcgtgccgctc
gatcagatgaccggcgatctgcggcggcgggccaagaccatcaatttcggcatcatctac
ggcatctcggcctttggcctggccgaccgcctcggcatcggccgcgaagaggcctcggcc
ttcatcaagcagtatttcgaacgcttcccgggcatccgcgattacatcgacaccaccaag
cgctcctgccgcgaaaagggctacgtgacgaccttgttcgggcgcgtctgccactatccg
cagatccgctccaacaacccgtcagagcgagcgagcgtggagcgtcaagccatcaacgct
ccgatccagggcaccgccgccgacatcatccgccgcgccatgacgcggatggaggacgcg
ctggaggcgaagaagctcacggcgcggatgctgctgcaggtgcacgacgaactcgtgttc
gaggtgcccgacgacgaggtcgaagcgacgattccggtgatcgcgcgggtgatggaggag
gcaccggcgccggcgctctcactcagcgtcccgctggtggtcgaggcgcgggcggcaggc
aactgggaagaggcgcactga
DBGET
integrated database retrieval system
