Methylobacterium sp. NI91: GU700_12610
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Entry
GU700_12610 CDS
T10782
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meni Methylobacterium sp. NI91
Pathway
meni03410
Base excision repair
meni03430
Mismatch repair
meni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GU700_12610 (recJ)
03430 Mismatch repair
GU700_12610 (recJ)
03440 Homologous recombination
GU700_12610 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meni03400
]
GU700_12610 (recJ)
DNA repair and recombination proteins [BR:
meni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GU700_12610 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GU700_12610 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GU700_12610 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QIJ82609
LinkDB
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Position
2762185..2763996
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AA seq
603 aa
AA seq
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MSLASPLDLPRPFLDVTASVLGRPWRERCGDPSLQALATTMTQAYGLPDLLARVLVGRGV
RPAEAEAYLSPRLRDLMPDPSVLVDMEAAVDRLAHAVRAREAVAIFGDYDVDGASSAALL
ANYLRALGVKVRIHIPDRITEGYGPNVGAVTALREEGAGLLVCVDCGTAGHEPLAAAAAL
GLDVIVLDHHGAPEELPQTRALVNPNRLDDLSGLGHLCAAGVVFMTLVALARRLRGEGAF
ASTAEPRLTDFLDLVALATVADVVPLVGLNRAFVVQGLAVMRGRGRPGLAALLDAAGLSE
PPEAWHLGFLVGPRINAGGRIGDAGLGARLLTTGDPIEARRIAEELDRLNRERQAIEAQA
VAEAEAEMDARLTRDPDRPVLIAASPEWHPGIVGLIAARLKERFGRPAFAFAVKPDGSAV
GSGRSVVGADLGGAVRGAVEAGLAVKGGGHAMAAGVTLAAGGLEAFGASLSRDLTEAVGR
ARAAEALLIDGTVSAGGATAELVRLIQRAGPFGQGAPEPVMALPRHRVVDAGIVGNGHVR
ARLVSGDGQAVGGIAFRAAQGPVGAALLGGIGRTFHVAGTLSCDRWRGAERAQVRICDLA
PCG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgcctcgcccctcgatctgcctcgccccttcctcgacgtcaccgcctcggtg
ctcgggcggccctggcgcgagcggtgcggggatcccagtcttcaggcgctggcgacaacc
atgacccaggcctacggcctgccggatctgctcgcccgtgtcctcgtcggccgcggcgta
cggccggccgaggccgaggcctatctgtccccgcgcctgcgcgacctgatgccggacccc
tccgtgctcgtggatatggaggcggcggtcgatcgcctggcccatgccgtgcgggcccgc
gaggcggtggcgatcttcggcgattacgacgtggacggcgcgtcgagcgcagcgctcctc
gcaaattatctgcgggcgctcggcgtcaaggtgcgcatccatatccccgaccgcatcacg
gaaggctacggcccgaatgtcggcgccgtcacggctttgcgcgaggagggtgcgggcctg
ctcgtctgcgtcgattgcggcactgccggccacgaaccgctggccgccgccgcggccctc
ggcctcgacgtgatcgtgctcgatcaccacggtgctccagaggagcttccgcagacgcgc
gccctggtcaacccgaaccggctcgatgacctgtccggcctcggtcatctctgcgcggcg
ggcgtcgtcttcatgaccctcgtcgcgctcgcccgccgcttgcggggggagggggctttc
gcctccaccgccgagccgcgcctcaccgacttcctcgacctcgtggcccttgccaccgtc
gccgacgtggtgccgctcgtcgggctcaatcgcgccttcgttgtccaggggctcgcggtg
atgcggggccggggccggccggggctggcggcccttctcgacgccgccggactgagtgag
ccgccggaagcatggcatctcggcttcctcgtggggccgcgcatcaatgccggcggccgc
atcggcgatgccggcctcggcgcgcggctcctcaccacgggtgatccgatcgaggcacgc
cgcatcgccgaggagctggaccggctcaatcgggagcgccaagccatcgaggcacaggcg
gtcgccgaggccgaagccgagatggatgcacgcctcacccgcgaccccgatcgtccggtg
ctgatcgccgcctcgcccgaatggcatcccggtatcgtcggactcatcgctgcccgcttg
aaggagcggttcggtcgaccggccttcgccttcgccgtcaagccggatggaagcgccgtc
ggctccggacgctccgtggtcggtgcggatctcggcggggccgtgcgcggcgcggtcgag
gccggtctcgccgtgaagggcgggggacatgcgatggccgccggtgtcacccttgcggct
ggcggtctcgaggccttcggtgcgagtctctcccgcgatctgaccgaggccgtcggccgg
gcgcgggcggccgaggcgctgctgatcgacggcaccgtgagcgccggcggcgcgaccgcg
gaactcgtgcggctgatccagcgtgccggacccttcggacaaggcgcgccggaaccggtg
atggcgctgccgcgccatcgcgtcgtcgatgcgggaatcgtcggcaacggacatgtccgc
gcgcgtctcgtcagtggggacgggcaagcggtcgggggcatcgcttttcgcgccgcacaa
ggaccggtcggcgccgctctgctcggcggcatcggccgcacgttccacgtcgccggaacg
ctctcctgcgaccgctggcgcggtgcggagcgagctcaggttcgaatctgcgatctcgcg
ccctgtggatag
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