Methylobacterium sp. NI91: GU700_17570
Help
Entry
GU700_17570 CDS
T10782
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
meni Methylobacterium sp. NI91
Pathway
meni03018
RNA degradation
Brite
Enzymes [BR:
meni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GU700_17570
Messenger RNA biogenesis [BR:
meni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GU700_17570
Ribosome biogenesis [BR:
meni03009
]
Prokaryotic type
rRNA processing factors
GU700_17570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIJ81144
LinkDB
All DBs
Position
complement(3822137..3825322)
Genome browser
AA seq
1061 aa
AA seq
DB search
MANNKMLIDAMHPEETRVVTVQGSRVEEFDFEAANRRPLRGNIYLAKVTRVEPSLQAAFV
EYGGNRHGFLAFNEIHPDYYQIPMADRLALIEAEAREEEEHREREERRPPRGRRSRGRRA
EARGARSGDTVKSQEAVSETVSDADAIPGEGQAADAPTPEAIEAVRAALVEERPEGDEVP
AAVEPGGDASASLPEAALEPGASAGDTSAEGAVEGSAEAEAPAALEPSDIAALSEAPNPP
VDAEASDAASAEAETVEPQPVAASAPVSEAEQAEAESDDDTQDSDAEDSDDEDADDEDSE
DDESDDDEDEDDDESDDEDSDDEEEDEESEDGERRVAQVGGSGDALAEIPERPRAYRRHY
KIQEVIKRRQIILVQVVKEERGTKGAALTTYLSLAGRYSVLMPNTGRGGGISRKITSAAD
RKRLKEVVADLDVPDGMGIILRTAGASRTKPEIKRDFEYLMRLWESVRELTLSSTAPALV
YEEGSLIKRAIRDLYNKDLDEVLVSGEDAYREAKDFMRMLMPGQSKVVKPYRDPTPIFAR
YGVEQQLDAMFSTHVALRSGGYLVINPTEALVSIDVNSGRATREHDIEDTALKTNLEAAE
EVARQVRLRDLAGLVVIDFIDMEEKRNNRAVEKRLNEALKNDRARIQVGRISPFGLLEMS
RQRIRTGVLESSSIPCAHCGGSGFVRATSSVALHILRSIEEVLLKSASHNVVLRTRTETA
LYILNQKRAHLYDLEQRFQVAITISADDRLVATSAFQLERGEPAVKHEGPVTGVRAVAIS
PVYEAEEFEDDIVETEEAEEAEITAEAETETEGAAEERSAADASEEGGGRRRRRRRRRGG
RSSGEGEVRARQDNGDDNGDEAGDDNGADPEDGDEAPESEAQVAEAAVGAEAERDETASE
AAEAGDDDGNGRRRRRGRRGGRGRGRTDRNGSSDADQDSEADEARSAEASEAVSEAHPEE
TASDALPVGPEEPVSDADVTTVSLAAENGSAAERPPVAPAPEVEPIRADAVAEAATEAAA
PVPAAPEPAPEPVAVVLTPPDPNRPKRAGWWSRTKAALGGE
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacaagatgctcatcgatgcgatgcatccggaggagacccgggtcgtcaca
gttcaaggctcgcgggtcgaggaatttgatttcgaggcggccaaccgccggcctctgagg
ggcaacatctatctcgccaaggtgacccgcgtggagccctcgctccaggcggccttcgtc
gagtacggcggcaaccgccacggcttcctcgccttcaacgagattcaccccgactactac
caaatcccgatggccgaccgcctcgcgctgatcgaggccgaggcgcgcgaggaggaggag
caccgcgagcgcgaggagcgccggcccccgcgcggccgccgctcgcgcggtcgccgggcc
gaggcccgcggcgcccgcagcggcgacacggtgaagtcgcaggaggcggtctcggagacc
gtgtccgacgcggatgcgatccccggcgagggccaggctgccgacgcgccgacgccggag
gcgatcgaggcggtgcgtgccgccctcgtcgaggagcggcccgagggcgacgaggtcccc
gcggcggtcgagcccggcggcgacgcctcggcgagcctgcccgaggccgcgctggagccc
ggcgcgtccgccggcgacacgtctgccgaaggagctgtcgaaggatcggccgaggccgag
gcgccggccgcgctcgagccctccgacatcgccgcgctctccgaggcgccgaacccgccc
gtcgacgcggaagcctccgacgccgcgtccgccgaggcggagacggtcgagcctcagccc
gtcgccgcctcggcgccggtctccgaggccgagcaggccgaagcggagtccgacgatgat
acccaggattcggacgccgaggattcggacgacgaggacgcggacgatgaggattccgag
gacgacgagtccgacgatgacgaggatgaggacgacgacgagtccgatgacgaggattcg
gacgacgaggaagaggacgaggaatccgaggacggcgagcgccgggtcgcgcaggtcggc
ggttcgggcgacgcgctcgccgagatccccgagcgtccgcgcgcctatcgccgccactac
aagatccaggaggtgatcaagcgccgccagatcatcctcgttcaggtcgtcaaggaggag
cgcggcaccaagggcgcggcgctcaccacctacctgtcgctcgccggccgctactcggtg
ctgatgcccaacaccggccgcggcggcggtatctcccgcaagatcacctcggccgccgac
cgcaagcgcctgaaggaggtcgtggccgatctcgacgtgccggacgggatggggatcatc
ctgcgcacggccggcgcctcgcgtaccaagcccgagatcaagcgcgacttcgagtacctg
atgcgcctgtgggagagcgtgcgcgagctgacgctgtcctccaccgccccggcgctggtc
tacgaggagggctcgctgatcaagcgggcgatccgcgacctctacaacaaggatctcgac
gaggttctggtctcaggcgaggacgcctaccgcgaggccaaggacttcatgcggatgctg
atgcccggccagtcgaaggtggtgaaaccctaccgcgacccgacgccgatcttcgcccgc
tacggcgtcgagcagcaactcgacgcgatgttctcaacccacgtggcgctccgctcgggc
ggctacctcgtcatcaacccgaccgaggcgctggtctcgatcgacgtgaactcgggccgc
gccacccgcgagcacgacatcgaggacaccgcgctcaagacgaacctcgaggcggcggaa
gaagtcgcccgccaggtgcgcctgcgcgatctggccggcctcgtcgtgatcgacttcatc
gacatggaggagaagcgcaacaaccgggcggtggagaagcgcctgaacgaggcgctgaag
aacgaccgggcgcgcatccaggtcgggcggatctcgcccttcggcctcctggagatgagc
cgccagcgcatccgcaccggcgtgctcgaatcctcctccatcccctgcgcccattgcggc
ggttcgggcttcgtgcgggcgacctcctccgtggcgctgcacatcctgcgctcgatcgag
gaggtgctgctcaagtcggcgagccacaacgtcgtgctgcgcacccgcaccgagaccgcg
ctctacatcctcaaccagaagcgggcacatctctacgacctggagcagcgcttccaggtg
gcgatcaccatctccgccgacgaccggctcgtggcgacttcggccttccagctcgaacgc
ggcgagccggcggtgaagcacgagggcccggtgacgggcgtgcgcgcggtggcgatctcg
ccggtctacgaggctgaggagttcgaggacgacatcgtcgagaccgaggaggccgaggag
gccgagatcacggccgaagccgagaccgagacggagggcgccgccgaggagcgctcggcc
gccgacgcctccgaggagggcggcggccgccgccgccgccgccgccgccgccgcggcggg
cgctcctccggcgagggcgaggtccgcgcgcgtcaggacaacggcgacgacaacggggac
gaggccggcgacgacaacggagccgatcccgaggacggcgacgaggctcccgaatccgag
gcgcaggtcgccgaggcggccgtcggcgccgaggctgagcgggacgagaccgcgtcggag
gctgccgaggccggcgacgacgacggcaacggacgccgccgccgccgcgggcgccggggc
ggccgcggccgcggccggaccgaccgtaacggttcctcggacgcggatcaggattccgag
gccgacgaggcgcggtcggcggaggcctccgaggccgtctccgaggcgcatcccgaggag
accgcctccgacgcccttccggtcggccccgaggagccggtcagcgacgccgacgtgacc
accgtctcgctcgccgccgagaacggcagcgccgccgagcggcccccggtcgctcccgcg
ccggaagtcgagccgatccgggcggatgccgtcgcggaggccgcgaccgaggcggcggcc
cccgtcccggcggcgccggagccggcgcccgagcccgtcgcggtggtgctgaccccgccc
gatccgaaccgcccgaagcgggccggctggtggtcgcgcaccaaggcggcgctcggcggg
gagtaa
DBGET
integrated database retrieval system
