Methylobacterium sp. NI91: GU700_22235
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Entry
GU700_22235 CDS
T10782
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
meni Methylobacterium sp. NI91
Brite
KEGG Orthology (KO) [BR:
meni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meni03400
]
GU700_22235 (addB)
Enzymes [BR:
meni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GU700_22235 (addB)
DNA repair and recombination proteins [BR:
meni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GU700_22235 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QIJ81950
LinkDB
All DBs
Position
4821087..4824224
Genome browser
AA seq
1045 aa
AA seq
DB search
MSARAAPRVFTISPGAPFLPTLAEALVSGRLVGAVGHDPLALAAVTLYLPTQRAVRALST
VLAQRLGGAALLPRMIPLGEADEAELDLSSNSLLETPEDLLYPSIPALERRLILARLVQK
WAETVDRELLPIDDEVPFLVPSSPADAVALAADLEGLMDALTVEGLPWSEIASAVEAEHS
RYFRLTLDFLRIAAEHWPDILAARSLADPAARARRLVLAEAARLDRDRPDDPVIVAGSTG
SVPATARLIAAVARLPRGAVVLPGLDLHLDEEGWEAIDGAGGTREAIAHGHPQAILHALT
GPRGLAAGRTEVETLGDLSPEAVAREKLLSQALRPAETTDAWARLDPAERVTLAREGMAG
LAVVEAADEREEALVAALALRETLETPGATAALVTPDRGLALRVSAELARWGIAAEDSAG
LSLARSQAGRFARLVAELAAEVSSARVIALLAHPFVRLGLSRSEVVRAAAALEIGGLRGP
APIPKNSFEGMRAAVALQRNATERVPRAKKRLKPIDWDLSENILDRLEIALDAFRTDLHP
ATGNLVALAALHREACERMMGGVEADEAIDDPSLDALDGLFDDLESAEQEDLPGRFSDYA
AFFTALARDRTVACAQRNAHPRLRILGPLEARLLSVDRIVLGGLDEAVWPVRQTTDAFLN
RPMRGDVGLSPPERRIGQAAHDFVQGLGTHDAVVTRAAKREGSPTVPSRFLQRLRAFGGD
AVWAGALARGQRLRGLAAILDRGQEAPPPRLKRPAPRPDPALFPERLSVTEIETLVRDPY
SIFARHILGLEALEPMAVVPGAAERGSLIHKILGDFSQAHPGPLPTDAETLLYTIAFEAF
GPLQDQYPELYAEWFPRYERMAVAFLEWEASQRQGLRAIHAERSGKLTIPLGERTFTLSA
RADRIEARADGGYCIVDFKTGTPPSNRTVFAGFSPQLTLEAAMLMHGAFEGLKATAPPDL
LYVHASGGRDPFRPIPIKPPPGDGRPVEAIVTEHLERLRGLIARYMTGEAAYLSRPYPQY
VRAYNEYDHLARVLEWSLAGEGEAA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcgcgccgctccccgcgtcttcacgatttctcccggtgccccgttcctgccg
acgctggcggaggccctggtctccggccgcctcgtcggcgcggtcggccacgatcccctc
gcgctcgccgcggtcacgctctacctgccgacgcagcgcgcggtgcgggcgctctcgacc
gtgctcgcacagcgcctgggcggggcggccctgctgccgcggatgatcccgctcggcgag
gccgacgaggccgaactcgacctctcctccaattcgcttctggagacgccggaagacctg
ctctacccctcgatccccgcgcttgagcgccggctgatcctggcgcggctcgtccagaaa
tgggcggagacggtggaccgcgaactgctgcccatcgacgatgaggtgcccttcctcgtg
ccctcctcccccgccgacgcggtggcgctcgccgccgacctcgaagggctgatggatgcg
ctcactgtcgagggtctgccctggagcgagatcgcctccgcggtggaggccgagcattcg
cgctacttccgcctcaccctcgacttcctgcggatcgccgccgagcactggcccgatatc
ctcgccgcccgctcgctcgccgacccggccgcccgcgcgcggcgcctcgtgctcgccgag
gccgcccggctcgaccgcgatcggccggacgatccggtgatcgtcgcgggctccaccggc
tcggtcccggcgaccgcccggctgatcgcggcggtggcccgcctcccccgcggcgccgtg
gtgttgccggggctcgacctgcatctcgacgaagagggctgggaggcgatcgacggcgcg
ggcggcacgcgggaggcgatcgcccacggccatccgcaggcgattctgcacgctctgacc
gggccgaggggcttggccgccggccggacggaggtcgagaccctcggcgatctctcaccc
gaggcggtggcccgggaaaagctgctgtcgcaggccctgcgcccggccgagaccaccgat
gcctgggcccggctcgacccggccgaacgggtgaccctcgcgcgggaagggatggccggc
cttgccgtggtcgaggcggcggacgagcgcgaggaggcgctggtcgccgcgctggcgctg
cgcgagacgctggagacgcccggcgccaccgccgccctcgtcacgcccgaccgtgggctg
gcgctgcgcgtgtccgccgaactcgcccgctggggcatcgcggcggaagattcggcgggc
ctgagcctcgcccgctcgcaggccggccgcttcgcccggctcgtcgccgaactcgccgcc
gaggtgtcctcggcccgtgtcatcgcgctgctcgcccatcccttcgtccggctggggctc
tcccgcagcgaggtggtgcgcgcggccgccgccctggagatcggcggcctgcgcggtcca
gccccgatcccgaagaacagtttcgagggcatgcgcgccgcggtggcactccagcgcaac
gccaccgagcgggtgccgcgcgccaagaagcgcctgaagccgatcgactgggatctttcc
gagaacatcctcgaccggctggagatcgccctcgacgccttccgcaccgacctccacccc
gccaccggcaacctcgtggcgctggccgctctccatcgcgaggcctgcgagcggatgatg
ggcggcgtcgaggcggacgaggcgatcgacgatccctccctcgacgccctcgacggcctg
ttcgacgacctcgaatcggccgagcaggaggatctgccggggcgattctccgattatgcc
gccttcttcaccgcgctcgcccgcgaccgcacggtggcctgcgcccagcggaacgcgcat
ccgcgcctgcgcatcctcggcccgctcgaagcgcgcctgctctccgtcgaccgcatcgtg
ctcggcgggctcgacgaggcggtctggccggtgcgccagaccaccgacgccttcctcaac
cggccgatgcgcggagatgtcggcctgagcccgccggagcgccggatcggacaggccgcc
cacgacttcgtccagggattgggcacccacgatgccgtggtgacccgcgcggccaagcgc
gagggctcgccgaccgtgccctcgcgcttcctccagcgcctgcgcgccttcggcggcgat
gcggtctgggccggtgccctcgcccgcggccagcgcctgcgcgggctcgcggccatcctc
gaccgcgggcaggaggcgccgccgccgcgcctgaagcggcccgcgccgcggcccgatccg
gccctgttcccggagcgtctcagcgtcaccgagatcgagaccctggtgcgcgacccatac
tcgatcttcgcccgccacattttgggattggaagcgctggagccgatggccgtggtgccg
ggcgcggccgagcgcggcagcctgatccacaagatcctcggcgatttctcgcaagcccat
cccggcccgctgccgacggatgcggagaccctgctctacaccatcgccttcgaggccttc
ggaccgcttcaggaccagtatccggaactctacgccgagtggtttccccgctacgagcgg
atggcggtggccttcctcgaatgggaggcgagccagcgccagggcctgcgggcgatccac
gccgagcgatccggaaagctgacgatcccgctcggcgagcggaccttcaccctctcggct
cgtgccgaccggatcgaggcccgcgccgacggcggctactgcatcgtcgacttcaagacc
ggcacgccgccgagcaatcgcacggtcttcgccgggttctcgccccagctcaccctggag
gcggcgatgctgatgcacggcgcgttcgaggggctgaaggccaccgcccccccggatctg
ctctacgtgcacgcctcgggcgggcgcgacccgttccggccgatcccgatcaagcctccg
cccggcgatggccgcccggtcgaggccatcgtcaccgagcatctcgagcgcctgcgcggg
ctgatcgcccgctacatgaccggcgaggcggcctatctatcgcggccctacccgcaatat
gtgcgcgcctataacgagtacgatcacctcgcccgcgtgctcgaatggtcgctggccggc
gaaggagaggccgcgtga
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integrated database retrieval system
