Methylobacterium sp. NI91: GU700_22290
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Entry
GU700_22290 CDS
T10782
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
meni Methylobacterium sp. NI91
Pathway
meni03018
RNA degradation
Brite
Enzymes [BR:
meni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GU700_22290
Messenger RNA biogenesis [BR:
meni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GU700_22290
Ribosome biogenesis [BR:
meni03009
]
Prokaryotic type
rRNA helicases
GU700_22290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIJ81960
LinkDB
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Position
4837864..4839567
Genome browser
AA seq
567 aa
AA seq
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MPFPSLPSPLARALTERNYAEPTPVQQAVLDAAPDRDLLVSAQTGSGKTVAFGLAIAGTL
LGPEEALPPPAAPLALVIAPTRELALQVQRELTWLYAQTGARVVPCVGGMDPRREARALE
AGVHIVVGTPGRLRDHMERGRLVTDELRAVVLDEADEMLDMGFREDLEFILAETPADRRT
LLFSATLPKAIVALAESYQRDALRLAVAGETRGHADIVYRAVRVMPREVEHAVVNVLRYV
DAPVAIVFCNTRDGVRHLQASLTERGFSAVALSGELGQGERNAALQALRDGRARVCVATD
VAARGIDLPGLDLVIHADLPHDAEVMQHRSGRTGRAGRKGTSVVLVPPARRRRAEQMFAI
AKVSPDWSGPPNADEIRALDRERMMSDPLLAEPETEEDREWEREWAEALMERCPPERLAA
AFARLYRSRIPVPEEVSDPAYETSRRPDSRGVPVGAPRIGEDEPAAWFRLNLGRRDRVEP
RRLLPMLTRRGQIGRGDIGAIRIFDNETAFEVRASAAEDFAAAFARRGPADVRIERMQGD
GPAPAKAPKSPRAQRHRREATKTGRGG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
ttgccatttccgtctctgccctcccccctcgcccgggcgctcaccgagcgcaactatgcc
gagccgacccccgttcagcaggcggtgctcgatgccgcgccggaccgtgacctgctcgtc
tcggcccagaccggctcgggcaagaccgtcgccttcggtctcgccatcgccggcacgctg
ctcgggcccgaggaggccctgccgccgccggccgcgccgctggccctcgtcatcgcgccg
acccgcgaactggcgcttcaggtgcagcgcgagctgacctggctctacgcgcagaccggg
gcgcgggtcgttccctgcgtcggcggtatggatccgcgccgcgaggcccgcgcgctggag
gccggtgtccacatcgtcgtcgggacgccggggcgtctgcgcgaccatatggagcggggc
cggctcgtcaccgacgagctgcgcgccgtcgtcctcgatgaggccgacgagatgctcgat
atgggcttccgcgaggatctcgaattcatcctcgctgaaaccccggcggaccgccgcacc
ctgctgttctcggcaaccctgccgaaggccatcgtcgcactcgccgagagctaccagcgc
gacgccctgcgcctcgcggtcgccggcgagacccgtgggcatgccgatatcgtctaccgc
gccgtgcgtgtgatgccgcgcgaggtcgagcacgccgtcgtcaacgtgctgcgctacgtc
gatgcgccggtggcgatcgtgttctgcaacacccgcgacggggtgcgccatctccaggcc
tcgctgaccgagcgtggcttctcggccgtggcgctctcaggcgaactcggccagggcgag
cgcaacgcggcgctccaggccctgcgcgacggtcgcgcccgcgtctgcgtcgccaccgac
gtcgccgcccgcggcatcgacctgccggggctcgacctcgtcatccacgccgacctgccg
cacgatgccgaggtgatgcagcaccgctccggccgtacaggccgcgccggccgcaaaggc
acgagcgtcgtgctggtgccgcccgcgcggcggcggcgcgccgagcagatgttcgccatc
gccaaggtcagccccgattggagcggcccaccgaatgcggacgagatccgcgccctcgac
cgcgagcggatgatgtccgatccgctgctcgccgagcccgagacggaagaggaccgggag
tgggagcgggaatgggccgaggcgctgatggagcgctgcccgcccgagcgtctcgccgcc
gccttcgcccggctctaccgctcgcgcatccccgtgccggaggaagtcagcgatccggcc
tacgagaccagccgtcgcccggattcccgcggcgtcccggtcggcgccccgcggatcggc
gaggacgagccggcagcgtggttccggctcaatctcggccgccgcgaccgggtcgagccg
cgccgcctgctgccgatgctgacccgtcgcgggcagatcggccgcggcgatatcggcgcg
atccggatcttcgacaacgagaccgccttcgaggtgcgagccagcgccgcggaggatttc
gccgccgccttcgcccggcgcgggccggcggatgtccgcatcgagcggatgcagggggac
ggtcccgcgcccgccaaggcgccgaagagcccccgcgcccagcgtcaccgccgcgaggcg
accaagaccggccggggcggctga
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