Metabacillus endolithicus: MVE64_05780
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Entry
MVE64_05780 CDS
T09915
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
menl
Metabacillus endolithicus
Pathway
menl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
menl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MVE64_05780 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
menl03021
]
MVE64_05780 (rpoD)
Transcription machinery [BR:
menl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MVE64_05780 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Pox_G7
COR
Motif
Other DBs
NCBI-ProteinID:
UPG64581
LinkDB
All DBs
Position
complement(1043989..1045110)
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AA seq
373 aa
AA seq
DB search
MADKQTHETEVTFEQVKDQLTEIGKKRGVLTYEEIAERMSNFEIESDQMDEYYEFLGEQG
VELIGEAGEDVEDADPNIQDLAKEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLSAN
EEINLAKRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYEKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPT
PEEIGEDMELTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccatgagacagaagtaacctttgaacaggtgaaagatcagtta
actgaaattgggaaaaaacgtggagttttgacatatgaagaaattgcagaacgtatgtct
aactttgaaatcgaatcagaccaaatggatgagtattatgaatttcttggtgaacaaggt
gttgaactaattggtgaagcgggtgaagatgttgaagatgctgatccaaatattcaagat
cttgctaaggaagaagaatttgatttaaatgacttaagtgttccgcctggagttaaaata
aatgaccctgtaagaatgtatctgaaagaaattggccgtgttgatttattatcagctaat
gaagaaattaatttagctaagcgtattgaggaaggcgatgaagaagcaaagcgtagactt
gctgaagctaaccttcgtctagtagttagtattgctaagcgctatgttggtcgtgggatg
ttattcttagatttaattcaagaaggtaatatggggttaatgaaggctgtcgaaaaattc
gactatgaaaaaggttataaatttagtacgtatgctacttggtggattcgtcaagcgatt
acacgtgcaattgcagaccaagcccgaacaatccgtattccggttcatatggttgaaacc
attaataaattaattcgtgttcaacgtcaattattacaggatttaggtagagaaccaact
ccagaagaaattggagaagatatggaactaactcctgataaggtaagagaaattctgaag
attgctcaagagcctgtgtcattagaaactccaatcggtgaagaagatgattcacattta
ggagatttcatcgaggatcaggatgctacctcaccttctgaacatgctgcttatgaatta
ttaaaagagcaacttgaagatgtgttagatacattaacagaccgtgaagaaaacgtattg
cgcctgcgctttggtcttgatgatggaagaacaagaactcttgaagaggttggaaaagta
tttggtgtaacacgcgagcgtattcgacaaatagaagcaaaagcgcttcgtaagttacgt
catcctagccgcagtaaacgtctaaaggatttcttagaatag
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