Metabacillus endolithicus: MVE64_15540
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Entry
MVE64_15540 CDS
T09915
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
menl
Metabacillus endolithicus
Brite
KEGG Orthology (KO) [BR:
menl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
menl03009
]
MVE64_15540 (rlmD)
Enzymes [BR:
menl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MVE64_15540 (rlmD)
Ribosome biogenesis [BR:
menl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MVE64_15540 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltransf_11
PrmA
Methyltransf_4
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UPG62002
LinkDB
All DBs
Position
3037174..3038562
Genome browser
AA seq
462 aa
AA seq
DB search
MTLTKAETMIAEIRHLDDRGSGQAVIWRENELGNPKKLKLTIPQTLPGEKVRVTVDQPER
RRRKVLPEEILEAHSDRLAPPCPHFDKCGGCVWQHWQYTAQLKQKTEHVKHAIEEQGFNP
ELVKETIGMDQPWHYRNKMEFTFAPDGSLGLHEQGNFRKVISLESCLIASKEMVEAAMEV
AVWVKDYQLKGYNKDTHEGLLRHLMVRQSFVTGEMMLGLFATEGPNDTLQKAVKDLVSRI
EAKYPQVKSLLWLENTQWADRTQSEKSHTLAGRDFIYDEMDGYRFRLWFDTFFQTNPTQA
QKLVDLAIEMGQPKKSESMIDLFCGVGTFSLPFANRVGKLAGIEIVESSIESAKRNASDN
GISNTYFLAKDARKGIDQVLETFGSPELLLLDPPRSGAGGKVMRRIGRSKPERIVYVSCN
PDTFATDIKELEQFNYELITVQPVDLFPHTVHVECVALLELK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgaccttgactaaagcagaaacaatgattgctgaaatacgtcatttagatgacaggggt
tcaggacaagctgttatttggcgggaaaacgaacttggtaatccgaagaaattaaaacta
actattccacaaacgcttccaggggagaaggtacgtgtaacggttgatcaaccagaaaga
agaagaagaaaggttctacctgaggagatcctagaagctcattctgatagattggcacca
ccttgtcctcattttgataaatgtggtggatgtgtgtggcagcattggcaatacacagcc
caattaaaacaaaaaacggagcatgtaaaacatgcaatcgaggaacaaggatttaatcct
gagctagttaaagaaacaattgggatggatcagccttggcactatcgcaataaaatggag
tttacatttgctcctgatggatctcttgggttacatgagcaagggaatttccgtaaagta
atctcgcttgaatcatgcttaattgcaagtaaagaaatggtcgaggctgctatggaagta
gcagtttgggtaaaagattatcaattaaaaggctacaataaagatacccacgaaggattg
cttcgtcatttaatggttcgacaatctttcgtaaccggagaaatgatgctggggcttttt
gcaacagaaggaccaaatgatacccttcaaaaggctgtgaaagatttggtttctagaatt
gaggcaaagtatccgcaagtaaaaagcttgttatggcttgaaaatacacaatgggcagat
cgtacacagtctgaaaaaagtcatacattagcaggacgagacttcatttatgatgaaatg
gatggctaccgtttccgtctgtggtttgatacattctttcaaacaaacccaactcaagct
caaaaattagttgatttagccatcgaaatgggccaaccaaaaaaatcagaaagcatgatt
gatcttttttgtggagttgggacattctctcttccatttgcaaatagagtcggaaagctt
gcgggtattgaaattgtagagagttctattgaatcagctaaaagaaatgcaagtgacaat
ggaatatctaatacgtatttcttagctaaggatgcaagaaaaggaattgatcaagtacta
gaaacgtttggaagccctgaacttctccttttagatcctcctagatcaggtgctggtgga
aaagtaatgagaagaattgggcgttctaaaccagaacgaattgtgtatgtatcttgtaat
cctgatacatttgcaactgatataaaagaacttgaacaatttaattatgagttaataaca
gtacagcctgttgacctatttcctcatactgttcatgttgaatgtgtagcgttattagaa
ctaaaataa
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