Candidatus Megaera endosymbiont of Mesostigma viride: LF888_01700
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Entry
LF888_01700 CDS
T07589
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
menm
Candidatus Megaera endosymbiont of Mesostigma viride
Brite
KEGG Orthology (KO) [BR:
menm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
menm03016
]
LF888_01700
Enzymes [BR:
menm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LF888_01700
Transfer RNA biogenesis [BR:
menm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LF888_01700
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UCM94729
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Position
complement(422348..422971)
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AA seq
207 aa
AA seq
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MRVTVFHNDLPSNFQLPGDIAVDTETMGLDLNRDRLCVLQLSNGDGDAYLVQFSRDNYDA
PNLKNLLLDKNRVKIFHFARFDLAIIKKYLGIELSNIFCTKIASILVRTYTEYHGLKDLC
RELLGINISKQQQSSYWGTEQLSEEQKEYASKDVIYLHSLKEILTKMLIAENRKDIAYKL
FEFLPTRVDLDLMGWNEIDIFSHSTTK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
ataagagttacagtttttcataacgatttaccgtcgaattttcagctaccaggtgatatt
gcggtagatacagaaactatgggtctagatttaaatcgggatcgtttatgtgtccttcaa
cttagtaacggtgatggagatgcttacttagttcaattctctagagataattatgatgct
ccaaatctaaaaaatttattactagataaaaatcgagtaaaaatttttcattttgctcgg
tttgacttagctataataaaaaaatacctcggtattgaattatcaaatattttttgcact
aaaattgcttctatattagttagaacttatacagaatatcatggcttaaaagatttatgc
agagaactacttggaattaatatttcaaaacaacagcaatcttcttattggggaactgag
cagcttagtgaagaacagaaagagtatgcttccaaagatgttatatatttacattcgctc
aaggaaatattaaccaaaatgcttattgccgagaatagaaaggatattgcttataaatta
tttgaattcctgcctaccagagtagatttagatttaatgggctggaacgaaattgatata
ttttcacatagtacaacaaaatga
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