Candidatus Megaera endosymbiont of Mesostigma viride: LF888_02085
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Entry
LF888_02085 CDS
T07589
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
menm
Candidatus Megaera endosymbiont of Mesostigma viride
Pathway
menm03420
Nucleotide excision repair
menm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
menm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF888_02085
03430 Mismatch repair
LF888_02085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
menm03400
]
LF888_02085
Enzymes [BR:
menm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF888_02085
DNA repair and recombination proteins [BR:
menm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF888_02085
MMR (mismatch excision repair)
Other MMR factors
LF888_02085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
UCM94485
LinkDB
All DBs
Position
508027..510192
Genome browser
AA seq
721 aa
AA seq
DB search
MQPLNPPQKEAVETTEGPLLVLAGAGTGKTKVLTSRIAYIISNNLAYPSQILAVTFSNKA
AKEMQNRINDITASDGLNIGTFHSISTRILRSHIHLIDNGMSQNFNIVDQDEQIKLVKNI
ALENNIDIKKYPPKLLHVIISKWKDQGVIPEKVNSSDTTSQESQIAYVIYQKYQKILQES
NLADFGDLLLYCNQLLINNPEVLKYYQNKFKYILIDEYQDTNAVQYVWARMLASDHKNIC
CVGDDDQSIYSWRGAEVKNILRFEKDFPNAKIIKLEQNYRSGSHILEAASSIIRNNKNRH
HKNLWTETQSQEKIKVISCWNEKEEARFVANQIGKYINSKQYNAGQIAILVRAGFQTRAF
EEVFISNTMPYQIIGGLRFYERMEIRDLLAYIRLAINKNDNLAFERVINVPKRSIGNATL
KKIKDKATDYSVSAFSALEKMIKNDEVKGKIKENLQHFVTLINQASLRYENESAFDVTKF
ILEKSGYLAALKEEKTEESRSRIENINEMLQAIDEAGTINEFVEHTSLVMDNEMLESDYG
GTVKIMTLHASKGLEFDVVFLPGWEEGIFPHQKSMLEQGDKGLEEERRIAYVGVTRAKKE
LFITYAESRRIFAEILNSIPSRFLAEIPAEICHKISSSNQLNYLGSKHSFYFENNNTAAT
YTPASIKLIPESQSNEKRPGNKINHEKFGDGIIIRKNGDSLDIVFEKCGLKTIKESYIKL
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctttaaatccacctcaaaaagaagctgttgaaactaccgaaggccccttgctc
gtactagctggagctggaaccggtaaaaccaaggttttaactagtagaatagcttatata
attagcaataatctcgcctatccaagccaaatactagctgttactttttcaaataaagca
gcgaaagaaatgcaaaaccgaattaatgacattactgcttctgatggtttaaatataggt
acatttcactctatctctacgagaatattgagatctcatatccatttaattgataacggt
atgagccaaaattttaatattgtcgaccaggatgagcaaataaaattagtcaaaaacatt
gcccttgaaaataatattgatattaagaagtatcctcctaaattactgcatgttattatc
tctaaatggaaagatcaaggggttatacctgaaaaggttaacagctccgatactacaagc
caggagtcacaaattgcttatgttatttaccaaaaatatcaaaaaatcttacaagagtcc
aaccttgctgattttggcgatctattattatactgcaatcaattactcatcaataatcct
gaggttcttaaatattaccaaaataaatttaaatatattttaattgacgaataccaggac
actaatgctgttcagtatgtatgggctagaatgcttgcaagtgatcataaaaatatttgc
tgtgttggggacgatgatcaatccatatatagttggcgaggggctgaggtaaaaaacatc
ctccgttttgaaaaagattttccaaatgcaaaaatcattaaactagaacaaaattatcgc
tccggttctcatatcctggaagcagcatctagtatcataagaaataacaagaacagacat
cacaagaatctttggactgaaacacaatcacaggaaaaaataaaagtaatttcctgctgg
aatgaaaaagaagaagccagattcgtagcgaaccaaataggaaaatatattaattctaaa
caatacaacgcaggtcaaattgccattcttgtcagagctggctttcaaaccagagctttt
gaagaagtgtttatcagtaacaccatgccttaccagataattggcggcttaaggttttat
gaaagaatggagattagggatttacttgcttatatccgtcttgcgatcaataaaaatgac
aatctagcttttgaaagagtgattaatgttccaaaaagatcaatcggcaatgctacccta
aaaaagattaaggataaagccaccgattactctgtttcagcgtttagcgctttagaaaaa
atgattaaaaatgatgaggttaaaggaaaaatcaaagaaaaccttcagcattttgttaca
ctcattaatcaagcatctttaagatatgaaaatgaatccgcatttgacgtaacaaaattc
attcttgaaaaatccggttatttagcggctttaaaagaagaaaaaactgaagaatccaga
agtagaattgaaaatatcaatgaaatgctacaagccatagacgaagctggcactattaac
gaatttgttgaacatacaagtttagtcatggataatgagatgcttgaatctgattatggc
ggcacagtgaaaatcatgaccttgcacgcttcaaaaggacttgaatttgatgtagtattt
ctaccaggatgggaagaaggaatatttcctcaccaaaaatctatgttagaacaaggagat
aagggattagaagaagaaagacgcattgcctacgtaggggttaccagggctaaaaaggag
ttatttattacctatgccgaaagcagaagaatatttgctgaaatattaaactcaatacct
tcccgcttcttagccgaaattccagctgaaatatgccataaaatttccagttcaaaccaa
ctaaattatttaggctcaaaacatagtttttattttgaaaataataataccgctgctact
tacacgcctgcttctattaaacttatccctgaaagccaatcgaatgagaaacgtcccggg
aacaagatcaaccacgaaaaattcggcgatggaataattattcgaaaaaacggcgatagc
ctagatatagtttttgaaaaatgcgggttaaaaactataaaggaaagttatattaaatta
atttaa
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