Candidatus Megaera endosymbiont of Mesostigma viride: LF888_03650
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Entry
LF888_03650 CDS
T07589
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
menm
Candidatus Megaera endosymbiont of Mesostigma viride
Pathway
menm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
menm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF888_03650 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
menm03400
]
LF888_03650 (xth)
Enzymes [BR:
menm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LF888_03650 (xth)
DNA repair and recombination proteins [BR:
menm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LF888_03650 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UCM93602
LinkDB
All DBs
Position
complement(845290..846078)
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AA seq
262 aa
AA seq
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MKLKIATWNINSINIRINDLIDFIGQHNPDVICLQELKCETSKFPYELLSHLPYNLYING
QKSYNGVAILSKIPADEVKTDFPGNLLSDQARFIEICFNSFMGFTRVISLYAPNGGGEVG
SDKFHIKLKFYDQFTNYINNLVSYDEKLFIGADYNIAPFDIDVYDPDNLQDTTCFTIVEK
ARMRKILNSGFVDNFRIIHPEKKEFSWWDYRAGAFEQNKGMRIDSILSSSNALPFLKDCF
IDYQTRTRSKPSDHAPVIAIYE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaaatagcaacctggaatataaactcaattaatatacgaataaatgatcta
attgattttataggccagcataatcctgacgttatatgcctgcaggaactaaaatgtgaa
actagtaaatttccttatgagttactatctcacttgccttataatttatatattaatggt
cagaaatcctataatggggtagctattctctcaaaaattccggctgatgaagttaaaact
gattttcctggtaatttactatccgatcaggcaagatttattgaaatctgctttaacagt
tttatggggtttactagggtaatatctttatatgctccaaatggcggaggggaggtaggt
agcgataaattccatataaagttaaagttttatgaccaatttactaattatataaataat
ttggtatcttatgatgaaaaattattcattggagcagactataatattgccccgtttgat
attgatgtttatgacccggataatttacaggatactacctgctttacaattgtagaaaaa
gctaggatgcggaagatattgaattccggttttgtcgataatttcagaattattcacccg
gaaaaaaaggaattttcctggtgggattatagagcaggagcttttgagcaaaataaggga
atgcgaatagattccatcttatctagctctaacgccttaccttttctaaaagattgtttt
atagattaccagacaagaacgcgaagcaaaccatcggatcatgcccctgttatagctatt
tatgaataa
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integrated database retrieval system
