Candidatus Megaera endosymbiont of Mesostigma viride: LF888_04000
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Entry
LF888_04000 CDS
T07589
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
menm
Candidatus Megaera endosymbiont of Mesostigma viride
Brite
KEGG Orthology (KO) [BR:
menm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
menm03016
]
LF888_04000 (truB)
Enzymes [BR:
menm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LF888_04000 (truB)
Transfer RNA biogenesis [BR:
menm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LF888_04000 (truB)
Prokaryotic type
LF888_04000 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Sec23_trunk
Motif
Other DBs
NCBI-ProteinID:
UCM93663
LinkDB
All DBs
Position
complement(923934..924836)
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AA seq
300 aa
AA seq
DB search
MDGWLNLYKPRGISSAKAVAVVKSYFKKSRIGHTGTLDLEAEGVLPIAIGQATKLVSILI
NSSKEYIFTIQFGAQTDTGDLAGKIIKKTDIIPTEDECLNVCHKFVGIIKQIPPIYSALK
INGVRAYKLARQNKEFEVNPRFITIYDLKLLCYDSHTKLATYLVNCSKGTYVRTLAEDIS
LSLHSLGFVVELRRTRVGIFTEENSINMFNINCKTFDEAHAVVKSKCLKVEDVLDDIPVL
EVDELVAQKIRYGQQCDFDKVENHDQIWLKYDNKILAIGSLSDESFKSSRVFNYKKDGEE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtggacggctggcttaatttatataaaccaaggggcataagttctgctaaagcggtagca
gttgttaaaagctattttaaaaaatctaggattggacataccggaactttagatctggaa
gcagaaggggtcctgccgatagctattggccaggcaacaaaattagtaagtattctcatt
aatagttcaaaagagtatatatttactattcagtttggcgctcaaactgataccggtgat
ttggctgggaaaattattaaaaaaacagatattattcctacagaagatgaatgcctgaat
gtatgccataaatttgttggtataatcaagcaaatacctccgatatattcagcactaaaa
atcaatggagttagggcttataagctggcaaggcagaataaggaatttgaagtaaaccca
cgtttcataacaatttatgacttaaaattattatgttatgatagtcatactaagcttgca
acttatctggtcaattgttctaaaggtacatatgttagaaccctagcggaagatatttct
ttatccttgcatagtttaggatttgtggtagaattgcggcgcacaagggttggaatattt
actgaagaaaactcaataaatatgtttaacataaactgcaaaacttttgatgaagctcat
gctgtagttaaaagtaagtgcttgaaggttgaagatgtactagacgacatcccggtactt
gaagtagatgaattagttgcccagaaaattaggtatggccagcaatgtgatttcgataaa
gtagaaaatcatgatcagatctggcttaaatacgataacaaaattttggctataggtagt
ttatctgatgaaagctttaaatcttcaagagtgtttaactataaaaaagatggagaggaa
tga
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