Micromonospora endophytica: Jiend_06130
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Entry
Jiend_06130 CDS
T08807
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
meno
Micromonospora endophytica
Pathway
meno00220
Arginine biosynthesis
meno00240
Pyrimidine metabolism
meno00250
Alanine, aspartate and glutamate metabolism
meno01100
Metabolic pathways
meno01110
Biosynthesis of secondary metabolites
meno01240
Biosynthesis of cofactors
Module
meno_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Jiend_06130 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Jiend_06130 (carB)
00220 Arginine biosynthesis
Jiend_06130 (carB)
Enzymes [BR:
meno01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Jiend_06130 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BCJ57191
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Position
complement(616794..620180)
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AA seq
1128 aa
AA seq
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MPKRTDLKHILVIGSGPIVIGQACEFDYSGTQACRVLRSEGIRVSLVNSNPATIMTDPEY
ADATYVEPITPEFVELVIAKERPDAVLPTLGGQTALNTAVALHEAGVLDKYGVELIGADI
EAIRRGEDRQLFKEIVAKAGVRIGIEDPAGLVPRSRVCHSMDEVRETVAELGLPVVIRPS
FTMGGLGSGMAHTDADLERIAGSGLAASPVHEVLIEESVLGWKEYELELMRDRHDNVVVV
CSIENLDPMGVHTGDSVTVAPAMTLTDREYQRLRDLGIAVLREVGVDTGGCNIQFAVNPA
DGRIVVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIPNDITRKTPAAFEPTL
DYVVVKIPRFAFEKFPGADPELTTTMKSVGEAMSLGRNFTEALNKAMRSMETKAAGFWTV
ADPPGATKENTLAALGTPHDGRLYTVERALRLGASIGEVAAASGGIDPWFLDQIAALVEL
RAEIVAAPVLDAELLRRAKRAGLSDRQLAALRPELAAEDGVRTLRHRLDIRPIYKTVDTC
AAEFEATTPYHYSSYDAETEVVGSARPKVLILGSGPNRIGQGIEFDYSCVHAVQALRGAP
AGPAEASGGGFETVMINCNPETVSTDYDTADRLYFEPLTFEDVLEVWHAEDSSGREAGGP
GVVGVIVQLGGQTPLGLAQRLKDAGVPVVGTSPESIHLAEERGAFGSLLARAGLRAPAHG
TATSYEEAKEIAEEIGYPVLVRPSYVLGGRGMEIVYDDATLRDYIGRATDISPDHPVLVD
RFLDDAIEIDVDALCDADGEVYLGGIMEHIEEAGIHSGDSSCALPPITLAGSHVAQVRRY
TEAIARGIGVRGLLNVQYALKDDTLYVLEANPRASRTVPFVSKATAVPLAKAAARIALGA
TVAELRDEGLLPATGDGGTLPPDAPIAVKEAVLPFKRFRTPAGKGVDSLLGPEMKSTGEV
MGIDTAFGHAFAKSQSAAYGSLPTSGRIFVSVANRDKRGMIFPVKRLADLGFEIVATAGT
AEVLRRHGIACEQAPKHYEAGSGDDAVSLILGGHVALVINTPQGSGASARSDGYEIRSAA
VTADIPCITTVPGAAAAVMGIEARIRGDMQVRPLQDLHATLRPSRAPR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcggaccgacctcaagcacatcctggtgatcggctccgggccgatcgtcatc
gggcaggcgtgcgagttcgactactccggcacccaggcgtgccgggtgctgcgtagcgag
gggatccgggtcagcctggtcaactcgaacccggccacgatcatgaccgatccggagtac
gccgacgccacctacgtcgagccgatcaccccggagttcgtcgaactggtcatcgcgaag
gagcggccggacgcggtgctgcccaccctgggtgggcagaccgcgctgaacaccgctgtc
gcgctgcacgaggccggtgtgctcgacaagtacggcgtcgagttgatcggcgcggacatc
gaggcgatccggcgcggcgaggaccggcagctgttcaaggagatcgtcgccaaggcgggc
gtacggatcggcatcgaggacccggcgggcctggtgccgcgctcgcgggtctgccactcg
atggacgaggtccgggagaccgtggcggagttgggcctgccggtggtgatccggccgtcg
ttcaccatgggtggcctcgggtccggcatggcgcacaccgacgccgacctggagcgcatc
gccggttccgggctggccgccagccccgtgcacgaggtgctgatcgaggagagcgtgctc
ggctggaaggagtacgaactcgaactcatgcgggaccgtcacgacaacgtggtggtggtc
tgctcgatcgagaacctcgacccgatgggcgtgcacaccggcgacagcgtgaccgtggcc
ccggccatgacgctcaccgaccgggaataccagcgcctgcgggacctgggcatcgcggtg
ctgcgcgaggtcggggtggacaccggcggctgcaacatccagttcgcggtcaacccggcg
gacggccggatcgtggtcatcgagatgaacccgcgggtctcccgctcctcggcgctggcc
tcgaaggcgacaggcttcccgatcgcgaagatcgccgcgaagctggccatcggctacacc
ctcgacgagattcccaacgacatcacccgcaagacccctgccgcgttcgagccgacgctc
gactacgtggtggtgaagatcccccggttcgcgttcgagaagttccccggcgcggacccg
gagctgaccaccacgatgaagtccgtcggtgaggcgatgagcctcgggcgcaacttcacc
gaggcgctgaacaaggcgatgcggtcgatggaaaccaaggccgccgggttctggaccgtc
gccgatccgccgggcgcgacgaaggagaacaccctcgccgcactgggtacgccgcatgac
gggcggctctacacggtcgagcgggcgctgcggctgggtgcctcgatcggcgaggtcgcc
gcggcgtcgggcgggatcgacccgtggttcctggaccagatcgccgccctggtcgagctg
cgtgccgagatcgtggccgcgccggtgctcgacgcggagctgctgcgtcgggcgaagcgg
gccggcctctccgaccggcagttggctgcgctgcgcccggaactggccgccgaggacggc
gtacggacgctgcggcaccggctcgacatccggccgatctacaagaccgtggacacttgc
gcggccgagttcgaggcgaccaccccgtaccactactcctcgtacgacgcggagaccgag
gtggtcggctcggcgcggcccaaggtgctgatcctcggctccgggccgaaccggatcggg
cagggcatcgagttcgactactcctgcgtgcacgcggtgcaggcgttgcgtggcgcgccg
gccggcccggccgaggcgtccggcggcggtttcgagaccgtcatgatcaactgtaacccg
gagacggtctccaccgactacgacaccgccgaccggctctacttcgagccgctgaccttc
gaggacgtgcttgaggtctggcacgccgaggactcctccggccgcgaggccggtgggccg
ggtgtggtcggggtgatcgtgcagctcggtgggcagaccccgctggggttggcgcagcgg
ctcaaggacgccggggtgccggtggtcggcacctcaccggagtcgatccacctggccgag
gagcggggggccttcggctcactgctcgcccgtgcgggcctgcgtgctccggcccacggc
accgccacctcgtacgaggaggcgaaggagatcgccgaggagatcggctatccggtgctg
gtccgcccctcgtacgtgctcggcgggcggggcatggagatcgtctacgacgatgcgacg
ctgcgtgactacatcggccgggccaccgacatctccccggaccacccggtgctggtggac
aggttcctcgacgatgccatcgagatcgacgtggacgcgctctgcgacgccgacggtgag
gtctacctcggcgggatcatggagcacatcgaggaggcgggcatccactccggtgactcc
tcctgcgcgttgccgccgatcacactggccggctcgcacgtggcccaggtccgccggtac
accgaggcgatcgcccggggcatcggcgtacgcggcctgctcaacgtgcagtacgcgctg
aaggacgacaccctgtacgtgctggaggccaacccgcgtgcctcgcgtaccgtgccgttc
gtctccaaggccacggcggtgccgctggccaaggcggcggcgcggatcgccctcggggcg
accgtcgccgagctgcgcgacgaggggttgctgccggccaccggggacggtggcacgctg
ccgccggacgcgccgatcgcggtcaaggaggcggtgctgccgttcaagcggttccgcacg
cccgccgggaagggcgtggactcgctgctcgggccggagatgaagtcgacgggcgaggtg
atgggcatcgacaccgccttcgggcacgccttcgccaagtcgcagtcggcggcgtacggg
tcgttgccgacctcgggccggatcttcgtctcggtggcgaaccgggacaagcgcggcatg
atcttcccggtgaagcgcctggccgacctgggcttcgagatcgtcgcgaccgccggcacc
gccgaggtgctgcgccggcacggcatcgcctgcgagcaggccccgaagcactacgaggca
ggttccggcgacgacgcggtgtcgttgatcctcggcggccacgtggcgttggtgatcaac
accccgcagggttccggcgccagcgcccgctccgacggctacgagatccgcagcgccgcc
gtcacggcggacatcccctgcatcaccaccgtccccggcgccgccgccgcggtgatgggc
atcgaggcccgcatccgcggcgacatgcaggtacgccccctccaggacctgcacgccacc
ctccgtccttcgcgggccccccggtga
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