Micromonospora endophytica: Jiend_07070
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Entry
Jiend_07070 CDS
T08807
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
meno
Micromonospora endophytica
Pathway
meno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Jiend_07070 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_07070 (ruvB)
Enzymes [BR:
meno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Jiend_07070 (ruvB)
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Jiend_07070 (ruvB)
RecFOR pathway proteins
Jiend_07070 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
AAA
AAA_16
AAA_5
RuvB_C
Mg_chelatase
AAA_22
nSTAND3
NTPase_1
AAA_14
AAA_3
Zeta_toxin
AAA_18
TIP49
TsaE
RNA_helicase
AAA_28
Rad17
AAA_19
AAA_25
AAA_33
AAA_17
IstB_IS21
T2SSE
Resolvase
NB-ARC
NACHT
Motif
Other DBs
NCBI-ProteinID:
BCJ57285
UniProt:
A0A915T203
LinkDB
All DBs
Position
complement(716546..717664)
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AA seq
372 aa
AA seq
DB search
MSAPDGNLVSAYVSEAERDAEVSVRPKRLDEFIAQHRVRDQLDLLLQGAMRRGSPPDHIL
LSGPPGLGKTTLANIVAAELGTGIRVTSGPAIERSGDLAAILTSLAEGDVLFIDEIHRIA
RPAEELLYSAMEDFRVDVVVGKGPGATAIPLDVEPFTLVGATTRSGLLTGPMRDRFGFVA
HLDFYAPAELEVLLRRSARILGVPITDEGSAEIAGRSRGTPRIANRLLRRVRDFAEVRAD
GVVTVETARAALTVYDVDALGLDRLDRAVLTALVDSFRGGPVGLSTLAVAVGSSRTRSRR
SASPSWCGPVCWPVRRAAEWPPRQPGTISGVSRQMVHSALKLLPRPISSRWTPMSRDLFV
ICAAFGVPRQSD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccggacggcaacctggtctcggcgtacgtcagcgaggcggaacgcgacgcg
gaggtgagcgtccggccgaaacggctcgacgagttcatcgcccagcaccgggtccgcgac
cagctcgacctgctgttgcagggcgcgatgcggcgtggctcgccgcccgaccacatcctg
ctctccgggccgccgggcctcggcaagacgacgctcgccaacatcgtcgccgccgagctg
ggcaccggcatccgggtgaccagcggcccggccatcgaacgctccggcgacctggccgcg
atcctgaccagcctcgccgagggcgacgtgctcttcatcgacgagattcaccgcatcgcc
cggccggcggaggagttgctctacagcgcgatggaggacttccgggtcgacgtggtggtc
ggcaaggggcccggcgccaccgccatcccgctggacgtcgagccgttcaccctggtcggt
gcgaccacccggtccggtctgctgaccgggccgatgcgggaccgcttcggtttcgtcgcg
cacctggacttctacgcccccgccgagttggaggtgctgctgcggcgctcggcgcgcatc
ctcggcgtaccgatcaccgacgaggggtcggcggagatcgccggccggtcccggggcacg
ccccggatcgccaaccgcctgctgcgccgggtgcgggacttcgccgaggtacgcgccgac
ggcgtggtcaccgtggagaccgcccgcgcggcgctgaccgtgtacgacgtggacgcgctc
gggctcgaccggctggaccgggcggtgctgacggcgcttgtcgactcgttccggggtggt
ccggtgggcctgtccaccctggcggtggcggtggggagcagccggacacggtcgaggagg
tctgcgagcccttcctggtgcgggccggtctgctggcccgtacgccgcgcggccgagtgg
ccaccgaggcagcctggcaccatctcgggcgtaagccgccaaatggtacattcggccttg
aagctccttccgcgcccgatctcttctcgatggacaccgatgagccgtgacctgttcgtg
atctgcgccgcattcggcgttcccagacagagcgactag
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