Micromonospora endophytica: Jiend_07180
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Entry
Jiend_07180 CDS
T08807
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
meno
Micromonospora endophytica
Pathway
meno03030
DNA replication
meno03430
Mismatch repair
meno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Jiend_07180 (dnaE)
03430 Mismatch repair
Jiend_07180 (dnaE)
03440 Homologous recombination
Jiend_07180 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meno03032
]
Jiend_07180 (dnaE)
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_07180 (dnaE)
Enzymes [BR:
meno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Jiend_07180 (dnaE)
DNA replication proteins [BR:
meno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Jiend_07180 (dnaE)
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Jiend_07180 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCJ57296
LinkDB
All DBs
Position
complement(728160..731693)
Genome browser
AA seq
1177 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFSEVKRQGMPAVAMTDHGNMHGANDFYKQAMAAG
VTPILGIEAYVAPESRFHKSRVRWGRPEQKSDDVSGSGGYTHKTIWARNKTGLHNLFTLT
TKAYTEGYFVKWPRMDAELLAEHADGLMATTGCPSGEVQTRLRLGQDAQALEAAAKYQDM
FGKENYFLELMDHGLDIEKRVRDGLVEIGRKLGIPPVVTNDSHYTHEAQSEAHDVLLCVQ
TGSNVADPNRFKFGGSGYYIKSADEMRGVDGSDVWLEGCRNTLLVAERVDPTGMFEFHNL
MPRFPVPEGETEESWFRKETFKGLARRFPNGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKNQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLEGIFDPKHPRYAEAGEIRGMYEQEADVKKVIDTARGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKELDLLALPLDDKGAYELLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLKEILAPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFIPFRDGCREHGYSDEAIQKVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMALYLSECRRMGIQVLPPDVNTSA
GPFTPVGREIRFGLGAIRNVGANVVAAIMRCREEKGEYADFYDFLSKVDAVVCNKKTIES
LIKAGAFDVMRHPRKALLAVHADAIDAYADVKRKEAVGQYDLFGAGFGDTEAATTTTVMP
VITDGEWDKRDKLAFEREMLGLYVSDHPLFGLEHILGPAADTTIAALSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVETLFFPNTYEVIGQYIAEDAIVVVKGRVD
RRDDIPRIMAMDMSMPDVSASATNKPVTLTIPVTRCTPPLVERLKETLVLHPGDAEVHVK
LLNGSRTTTLRLGPVRVAATTALMADLKSVLGPANVT
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcgttcgcgcatctgcacgtgcacacggagtactcgatgctcgacggggcg
gcccggctcaaggacctgttctccgaggtcaagcggcaggggatgccggccgtggcgatg
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggccgccggc
gtcaccccgattctgggcatcgaggcgtacgtggcgccggagtcgcgcttccacaagtct
cgggtgcgctgggggcggccggagcagaagagcgacgacgtctccggtagcggtggttac
acccacaagacgatctgggcgcgtaacaagaccggcctgcacaacctcttcacgctcacc
accaaggcgtacaccgagggttacttcgtcaagtggccccggatggacgccgagctgctc
gccgagcacgccgacggcctgatggccaccaccggctgtccctccggcgaggtgcagacc
cggctgcggctgggccaggacgcgcaggccctcgaagccgccgcgaaataccaggacatg
ttcggcaaggagaactacttcctggagctgatggaccacggcctggacatcgagaagagg
gtccgggacgggctggtcgagatcggccgcaagctgggcatcccgccggtggtcaccaac
gactcgcactacacgcacgaggcccagtccgaggcgcacgacgtgctgctctgcgtgcag
accggcagcaacgtcgccgacccgaaccggttcaagttcggcggcagcggctactacatc
aagtccgccgacgagatgcgcggcgtggacggctccgacgtctggctggagggctgccgc
aacacgctgctggtggcggagcgggtcgacccgaccgggatgttcgagttccacaacctg
atgccgcgcttcccggtgcctgagggcgagaccgaggagtcctggttccgtaaggagacc
ttcaaggggctggcccgccgcttcccgaacgggatccccgagggacacgtggtgcaggcc
gagtacgagctgggcgtcatcatccagatgggcttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggccaagaaccagggcatcgccgtcggtccgggccgtggctcggcg
gccggctcccttgtcgcgtacgcgttgggcatcaccgacctggacccgatcccgcacggg
ctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgatgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtgatcaagtacgtcaccgacaagtggggcgaggac
aaggtcgcccagatcgccaccttcggcaccatcaaggcgaaggccgcgatcaaggactcg
gcgcgggtgctcggctacccgtacgcggtcggtgaccggatcaccaaggccatgccgccg
gccgtgatgggcaaggacatcccgctcgagggcatcttcgacccgaagcacccccgctac
gccgaggccggcgagatccgcggcatgtacgagcaggaagccgacgtcaagaaggtcatc
gacaccgcccggggcatcgaggggctgatccggcagaccggcgtgcacgccgccggtgtg
atcatgtccgccgagccgatcatcgagcacatcccgctgatgcgccgggactccgacggg
gtcatcatcacccagttcgactacccgacgtgcgagtcgctcgggctgttgaagatggac
ttcctcggcctgcgcaacctgacgatcatcgacgacgcggtcaagaacatccagctcaac
cacggcaaggagctggacctgctggcgctgccgctggacgacaagggtgcgtacgagctg
ctggcccggggcgacaccctgggcgtgttccagctcgacggcgggccgatgcggtcgctg
ctgcggatgatgaaaccggacaacttcgaggacatctccgccgtgctggcgctgtaccgt
cccggcccgatgggcgtggactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggagccgctcaaggagatcctcgcccccacc
tacggcctgatcgtctatcaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
acgctcggccaggccgacctgctgcgccgggcgatgggcaagaagaagaaggagatcctc
gacaaggagttcatcccgttccgggacggctgccgcgaacacggctactccgacgaggcc
atccagaaggtctgggacgtgctggtcccgttcgccgggtacgccttcaacaaggcgcac
tccgccgcgtacgggctggtgtcgtattggactgcgtacctgaaggcgcactacccggcc
gagtacatggcggcgctgctgacctccgtcggtgacgacaaggacaagatggcgctctac
ctgtcggagtgccgccggatgggcatccaggtgctgccgccggacgtgaacacctccgcc
gggccgttcacgccggtcggcagggagatccgcttcggtctcggcgcgatccgcaacgtc
ggcgcgaacgtggtggccgcgatcatgcgctgccgtgaggagaagggcgagtacgccgac
ttctacgacttcctgtccaaggtggacgcggtggtctgcaacaagaagacgatcgaatcg
ctgatcaaggcgggtgccttcgacgtgatgcggcacccgcgcaaggccctgctcgcggtg
cacgccgacgccatcgacgcgtacgccgacgtcaagcgcaaggaggcggtcggccagtac
gacctgttcggcgcgggcttcggcgacaccgaggcggcgaccaccaccaccgtcatgccg
gtcatcaccgacggcgagtgggacaagcgcgacaagctcgccttcgaacgcgagatgctc
ggcctctacgtctccgaccacccgctgttcggtctggaacacatcctcggcccggcggcc
gacaccacaatcgccgcgctctccgaggagggcaccgtgcccgacggcgcggtggtcacc
ctcgccggcatcctctccggcgtgcagcggcgggtcaccaagcagggccgggcctgggcc
tcggccaccctggaagacctcgccggtggggtggagaccctcttcttccccaacacctac
gaggtgatcgggcagtacatcgccgaggacgccatcgtggtggtcaaggggcgggtggac
cggcgcgacgacatcccccgcatcatggccatggacatgtccatgcccgacgtctccgcc
agcgcgacaaacaaaccggtcaccctcaccatcccggtcacccgctgcaccccacccctg
gtggaacgcctcaaggagaccctggtgctgcaccccggcgacgccgaggtgcacgtcaaa
ctcctcaacggcagccgcaccaccaccctgcgcctcggccccgtccgcgtagccgccacc
accgccctgatggccgacctcaaatccgtcctaggccccgccaacgtaacctga
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