Micromonospora endophytica: Jiend_07820
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Entry
Jiend_07820 CDS
T08807
Symbol
topA_1
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meno03032
]
Jiend_07820 (topA_1)
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_07820 (topA_1)
Enzymes [BR:
meno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Jiend_07820 (topA_1)
DNA replication proteins [BR:
meno03032
]
Prokaryotic type
DNA Topoisomerases
Jiend_07820 (topA_1)
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Jiend_07820 (topA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyco_hydro_19
Motif
Other DBs
NCBI-ProteinID:
BCJ57360
LinkDB
All DBs
Position
complement(784918..785910)
Genome browser
AA seq
330 aa
AA seq
DB search
MPTVRLRRSDPGRPGYARRRRGAGWSFLDPRGEPVRDLDELSRLRSLVIPPAWRDVWISP
YPHGHIQATGIDAAGRKQYLYHPLWRQRRDEAKFDHVLEVARRLPVLRERVGHDLAGRGL
RRERVLATVTRLLDTGIFRIGSDQYAAGDDPTFGVATLRPEHARSRRGCVLFEFPAKGGI
EQARLVEDPELCRVLVNLRRRRRAADRLFGYWDGRDWRDVRADEINDYLRTASGGEMTAK
DFRTWHATVRAATELAGFATARSVTARRRAVAGVMREVAELLGNTPTVARTSYVDPRVVD
LFHDGVVAPVTRDAPREQAEEAVLTLLERA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaccgtgcggttgcggcgtagcgatccgggccggccggggtacgcccggcggcgg
cgcggtgccggctggtcgtttctcgacccgcgcggcgagccggtacgcgacctcgacgag
ctgtcccggttgcggtcgctggtcatcccacccgcgtggcgtgacgtctggatctcgccg
tacccgcacgggcacatccaggccaccggcatcgacgccgcgggccgcaagcagtacctc
tatcacccgctctggcggcaacggcgggacgaggcgaaattcgaccatgtgttggaggtg
gcgcgccggttgccggtgctgcgggaacgggtcggtcacgaccttgccggacgcgggctg
cgccgggaacgggtgctggcgacggtgacccggctgctggacaccggcatcttccgtatc
ggcagcgaccagtacgccgccggcgacgatccgacgttcggggtggccaccctgcgtccc
gagcacgcccggtcccggcgcggctgtgtgctcttcgagttccccgccaagggcggcatc
gagcaggcccggctggtggaggaccccgaactgtgccgggtgcttgtcaacctgcgtcgc
cggcggcgggccgcggaccggctcttcggctactgggacggacgcgactggcgggacgtc
cgcgccgacgagatcaacgactatctgcgtacggcgagcggcggcgagatgaccgcgaag
gacttccgcacctggcacgcgacggtgcgggccgccaccgaactggccgggttcgccacg
gcccggtccgtcacggcccggcgacgggcggtcgccggggtgatgcgggaggtggcggag
ctgctgggcaacaccccgacggtggcccgcacgtcctacgtcgatccccgggtggtggac
ctgttccacgacggcgtggtcgccccggtcacccgggacgctccccgagagcaggccgaa
gaggcggtgctgaccctgctggagcgggcctga
DBGET
integrated database retrieval system
