Micromonospora endophytica: Jiend_11500
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Entry
Jiend_11500 CDS
T08807
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meno03016
]
Jiend_11500
Enzymes [BR:
meno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Jiend_11500
Transfer RNA biogenesis [BR:
meno03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Jiend_11500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BCJ57728
LinkDB
All DBs
Position
1175523..1177055
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AA seq
510 aa
AA seq
DB search
MTDEPPLRRRAAASRTGNDTHHPPSARPEPSDAGTEPTGSESVPLTAPREGTPEPIALPE
HLAEVVARFAAGTGPVALDAERASGYRYSQRAYLVQLRRAGAGTALIDPLPLPDLSTLDA
AIADAEWVLHAANQDLPCLAEVGLRPRRLFDTELAARLAGFERVGLAALTEHLLGFSLEK
HHSAADWSSRPLPQSWLTYAALDVELLVDLRDALDAELTRQDKSAWAAEEFAALVRTGAR
PPRVRAEPWRRTSGIHRVRGPRAQARVRSLWYARDQIAARRDSAPGRVLPDSAIVAAAEL
DPKDEKALLTLPGFGGRSVRRLARTWLAALDDARQLPDDALPVTPTVEGPPPPHRWAERD
PAAAARLARCREVVLRIAGEHRLPPENLITPDTVRRIAWQPPEEITESTVAEVLRGFNAR
EWQITLLLPSFAEALSLPPPLPLTPPLPSPPCPCPLPGKPTSSVDQEVCVGRTPESRRKL
LDQPGRCGGGVGARWRGVGWGGCGVGHREG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccacccctgcgccgtcgggccgccgcaagccgtacgggaaacgacacg
caccacccgccgtcggcgcggccggagccgtcggacgcggggaccgaacccaccggcagc
gagtccgtgccgctgaccgcaccccgtgagggcacccctgagccgatcgccctccctgag
catctcgccgaggtggtggcacgtttcgccgccggcaccgggccggtggccctggacgcc
gaacgcgcctccggctaccgctacagccagcgggcgtacctcgtgcagctgcgtcgcgcc
ggcgccggcaccgcgctgatcgacccgttacccctgcccgacctgagcaccctcgacgcc
gcgatcgccgatgcggagtgggtgctgcacgcggcaaaccaggacctgccctgcctggcc
gaggtggggctgcggccgcgccggctcttcgacaccgagttggccgcccggctcgccggg
ttcgaacgggtcggcctggccgcgctcaccgaacatctgctcggcttcagcctggagaag
caccactccgcagcggactggtccagccgaccgctgccgcagtcgtggctgacctacgcg
gcgctggacgtggagctgcttgtcgacctgcgcgacgcgctcgacgcggagctgacccgg
caggacaagtccgcgtgggccgcggaggagttcgccgcgttggtgcgcaccggggcccgg
ccgccgcgggtacgcgccgagccgtggcggcgcacctccggcattcaccgggtacgcggg
ccgcgggcgcaggcccgggtccgctcgctgtggtacgcccgcgaccagatcgccgcgcgc
cgtgactcggcaccgggccgggtgctgcccgactcggccatagtggcagcggccgagctg
gacccgaaggacgagaaggcgctgctcaccctgcccggtttcggtggccggtcggtgcgc
cggctggcccggacctggttggccgcgctcgacgacgcccgacagttgcccgacgacgcg
ctgccggtgacgccgacggtggagggtccgcccccaccgcaccggtgggccgagcgggat
ccggcggctgccgcccggctggcgcgctgccgtgaggtggtgttgcggatcgccggcgag
caccgtctcccaccggagaacctgatcacccccgacacggtccgccggatcgcctggcag
ccccctgaggagatcaccgagagcacggtggccgaggtgctacgcggcttcaacgcccgc
gaatggcagatcaccctcctgctcccctccttcgccgaagccctctccctcccccctccc
ctccccctaacccctcccctgccctcccccccctgcccctgccccctgccgggcaagccg
acctcctcggttgatcaagaagtttgcgtcggccgcacgcctgaatccagacgcaaactt
cttgatcaaccagggcggtgtgggggtggggtgggggcgcggtggaggggggtggggtgg
ggtgggtgtggggtgggccacagggaggggtag
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