Micromonospora endophytica: Jiend_12140
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Entry
Jiend_12140 CDS
T08807
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
meno
Micromonospora endophytica
Pathway
meno00300
Lysine biosynthesis
meno00470
D-Amino acid metabolism
meno01100
Metabolic pathways
meno01110
Biosynthesis of secondary metabolites
meno01120
Microbial metabolism in diverse environments
meno01230
Biosynthesis of amino acids
Module
meno_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Jiend_12140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Jiend_12140 (dapF)
Enzymes [BR:
meno01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Jiend_12140 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
BCJ57792
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Position
complement(1244499..1245350)
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AA seq
283 aa
AA seq
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MEFTKGHGTGNDFVILPDPDGTLDLTPDLVAAICDRRRGIGGDGVLRVVRAAKHPDGVAL
AGEAEWFMDYWNSDGSFAEMCGNGARVFVRYLLETGLATAAGGALPVATRAGLVRARLDG
DVIAVEMRRPRLHATSTATLGGLTLPGTAVDVGNPHLVCPLPAGLELTGLDLTRAPGFDP
ALFPTGVNVEFTAPGDPVTGVDAHVLMRVYERGSAETLSCGTGACAVAAVALHDVARDTG
TVAVDVPGGRLTVTVTDDSCWLSGPALLVATGTLTPTPTPTHP
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtggagttcaccaagggacacggcaccggtaacgacttcgtgatcctgcccgatccggac
ggcacgctcgacctgacgcccgacctggtggcggcgatctgtgaccggcggcgggggatc
ggcggcgacggcgtgctacgggtggtccgggccgcgaagcaccccgacggcgtggcgctg
gccggcgaggcggagtggttcatggactactggaactccgacggatccttcgccgagatg
tgcggcaacggtgcccgggtcttcgtccggtacctgctggagaccgggctggccacggcg
gcgggcggcgcgttgccggtggccacccgggccgggctggtccgcgcccggctcgacggt
gacgtcatcgccgtcgagatgcgccgtccccggctgcacgcgacctcgaccgccaccctg
ggcggattgaccctgccgggcaccgcggtggacgtcggcaatccccacctggtctgcccg
ctgccggccgggctggagctgaccgggctggacctgacccgggcaccggggttcgacccg
gcgcttttcccgacgggggtcaacgtcgagttcaccgcgcccggcgacccggtcaccggc
gtcgacgcgcacgtgctgatgcgggtctacgaacggggctccgccgagaccctttcctgc
ggcaccggtgcctgtgcggtggccgccgtcgccctgcacgatgtcgcccgggacaccgga
acggtggccgtcgacgtccccggcggccgtctcaccgtcaccgtcaccgacgactcgtgc
tggctctccggccccgccctcctcgtcgccaccggcaccctcacccccacccccaccccc
acccacccctaa
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