Micromonospora endophytica: Jiend_12770
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Entry
Jiend_12770 CDS
T08807
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
meno
Micromonospora endophytica
Pathway
meno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Jiend_12770 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meno03019
]
Jiend_12770 (pnp)
03016 Transfer RNA biogenesis [BR:
meno03016
]
Jiend_12770 (pnp)
Enzymes [BR:
meno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Jiend_12770 (pnp)
Messenger RNA biogenesis [BR:
meno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Jiend_12770 (pnp)
Transfer RNA biogenesis [BR:
meno03016
]
Prokaryotic type
tRNA degradation factors
Jiend_12770 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_PNO1_2nd
KH_NusA_1st
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
BCJ57855
LinkDB
All DBs
Position
complement(1314745..1317093)
Genome browser
AA seq
782 aa
AA seq
DB search
MTETRLGTETRTAVIDNGSFGTREISFSTGRLARQAAGSVIAQLGETVVLSATTAGKQPK
EQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFVKGLRNEV
QVVETILALDPQHPYDVVAINAASMSTKLSGLPFSGPIGATRMAHVDGQWVAFPTHEELS
RATFDMVVAGRALADGDVAIMMVEAEATENTVKLVAGGAAAPTEEVVASGLEAAKPAIRE
LCRAQSELADVAAKPVAEFPVFLDYSDDAYDAVAEFARADVAEALQIAGKADREGALDAI
KARLQEEVGPRFEGREKEISAAFRSLTKSEVRSRVLREQVRIDGRGPRDIRPLSAEVGVL
PRVHGSALFERGETQILGVTTLNMLRMEQALDTLSPEKSKRYMHNYNFPPYSTGETGRVG
SPKRREIGHGALAERALIPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLGLLSAG
VPLKAPVAGIAMGLISDEVEGKTQYVTLTDILGAEDAFGDMDFKVAGTRDFVTALQLDTK
LDGIPSDVLAAALQQAYEARQTILDVMQRAIEAPAEMSDYAPRVTTVKIPVDKIGMVIGP
KGQTINAIQDETGAEISIEDDGTIYVGATNGPSAQAAVERINAIANPTLPKMGDRFLGTV
VKTAPFGAFVSLLPGRDGLLHISKVGDGKRVEKVEDFLNVGDRVEVEIADIDQRGKIYLD
KVRPEGAEAPAPAEAGGERPASRERGDRGPRDRGDRGGRAPERGEGGEGGGESRPRRRTR
HS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaccagactcggcaccgaaacccgcaccgccgtgatcgacaacgggtcgttc
ggcacccgggagatcagcttctccaccggccggctggcccgccaggccgccggctccgtc
atcgcccagctcggcgagacggtcgtcctctccgccaccaccgccggcaagcagccgaag
gagcagttcgacttcttcccgctgaccgtcgacgtcgaggagcggatgtacgccgcgggc
cgcatccccggctcgttcttccgtcgtgagggccggcccagcgaggacgccatcctcacc
tgccgcctgatcgaccggccgctgcgcccgtcgttcgtcaagggcctgcgcaacgaggtc
caggtcgtcgagaccatcctcgcgctcgacccgcagcacccgtacgacgtggtggcgatc
aacgccgcctcgatgtcgaccaagctctccggcctgccgttctccggcccgatcggggcc
acccggatggcgcacgtcgacggccagtgggtcgccttcccgacccacgaggagctgagc
cgcgccaccttcgacatggtggtggccggtcgggccctggccgacggcgacgtcgcgatc
atgatggtcgaggccgaggccaccgagaacaccgtcaagctggtcgccggcggcgccgcc
gcgccgaccgaggaggtcgtggccagcggcctggaggccgccaagccggccatccgggag
ctgtgccgggcgcagagcgagctggccgacgtggccgccaagccggtcgccgagttcccg
gtcttcctggactactccgacgacgcgtacgacgcggtcgccgagttcgcccgcgccgac
gtggccgaggccctccagatcgccggcaaggcggaccgtgagggtgccctggacgcgatc
aaggcccgcctccaggaggaggtcggtccgcgtttcgagggccgggagaaggagatctcc
gccgccttccgctcgctgaccaagtccgaggtgcgcagccgggtgctgcgggagcaggtc
cgcatcgacggccgtggcccgcgtgacatccggccgctgagcgccgaggtcggcgtgctg
ccccgggtgcacggttcggcgctgttcgagcgcggcgagacccagatcctcggcgtcacc
acgctcaacatgctgcgcatggagcaggcgctggacaccctctccccggagaagtccaag
cgctacatgcacaactacaacttcccgccgtactcgaccggtgagaccggccgggtcggc
tcgccgaagcgccgtgagatcggccacggggccctcgccgagcgggcgctgatcccggtg
ctgccctcgcgcgaggagttcccgtacgccatccggcaggtctccgaggcgctcggctcc
aacggctccacctcgatgggttcggtctgcgcctccacgctgggcctgctctccgccggt
gtgccgctgaaggcgccggtcgccggcatcgccatgggcctgatctccgacgaggtcgag
ggcaagacgcagtacgtcacgctcaccgacatcctcggcgctgaggacgcgttcggcgac
atggacttcaaggtcgccggcacccgtgacttcgtcaccgcgcttcagctcgacaccaag
ctcgacggcatcccgtccgacgtgcttgccgccgcgctccagcaggcgtacgaggcccgg
cagaccatcctcgacgtgatgcagcgggcgatcgaggcgccggccgagatgtcggactac
gcgccgcgggtcaccacggtgaagatcccggtcgacaagatcggcatggtgatcggcccg
aaggggcagaccatcaacgccatccaggacgagaccggcgccgagatctccatcgaggac
gacggcaccatctacgtcggtgccaccaacggcccgtcggcgcaggccgcggtcgagcgg
atcaacgcgatcgccaacccgaccctgcccaagatgggcgaccgcttcctgggcacggtg
gtcaagaccgcgccgttcggtgcgttcgtctcgctgctgccgggccgcgacggcctgctg
cacatctccaaggtgggcgacggcaagcgggtcgagaaggtcgaggacttcctcaacgtc
ggcgaccgggtcgaggtcgagatcgccgacatcgaccagcgcggcaagatctacctggac
aaggtccgcccggagggtgccgaggctccggctccggccgaggccggcggcgagcggccg
gccagccgggagcggggtgaccggggtccgcgtgaccgtggcgaccgtggtggccgtgcc
ccggagcggggcgagggcggcgagggcggcggcgagtcgcgcccgcggcgccgcacccgg
cacagctga
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