Micromonospora endophytica: Jiend_14250
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Entry
Jiend_14250 CDS
T08807
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meno03032
]
Jiend_14250
03036 Chromosome and associated proteins [BR:
meno03036
]
Jiend_14250
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_14250
DNA replication proteins [BR:
meno03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Jiend_14250
Chromosome and associated proteins [BR:
meno03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Jiend_14250
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Jiend_14250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
BCJ58003
LinkDB
All DBs
Position
complement(1461266..1461904)
Genome browser
AA seq
212 aa
AA seq
DB search
MNKAELIEALAVRLGDRKTATAALDAVLAEVQAAVTKGEKVAITGFGAFEKRVRGARTAR
NPRTGEAVKVKKTSVPTFRPGAGFKEMVASGKVPKATAAAKKAVATTAKSTGAKATGTKA
TGAKATAAAKKTAAGTKATAAAKKTTTAKTAAAKKTTATKATKTTAAKKTATKKAAPAKK
TAATKATAAKKTATAKKAPAKKAPARKAATRR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggccgagctcatcgaggcgctcgccgttcgcctgggggaccggaagacggcg
acggccgcgctcgacgcggtcctcgctgaggtccaggcggcggtcaccaagggcgaaaaa
gtggcgatcaccggtttcggagcgttcgagaagcgcgtacggggtgcgcgaacagcgcgc
aacccgcgcacgggggaggcggtgaaggtcaagaagacctccgtaccgaccttccgcccg
ggtgccgggttcaaggagatggtggccagcggcaaggtgccgaaggccacggcggcggcg
aagaaggccgttgcgaccaccgccaagagcactggcgccaaggcaaccggcaccaaggcc
acaggtgccaaggcgaccgcggcggcgaagaagaccgctgcgggcacgaaggcgaccgcg
gcggcgaagaagacgaccacggcgaagaccgcggcggccaagaagaccaccgctaccaag
gccaccaagaccacggcggccaagaagaccgcgacgaagaaggccgcgccggcgaagaag
accgccgcgaccaaggccaccgcggccaagaagaccgcgacggcgaagaaggccccggcg
aagaaggcgccggccaggaaggcggcgactcggcgctga
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