Micromonospora endophytica: Jiend_16460
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Entry
Jiend_16460 CDS
T08807
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
meno
Micromonospora endophytica
Pathway
meno03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Jiend_16460 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meno03019
]
Jiend_16460 (orn)
03009 Ribosome biogenesis [BR:
meno03009
]
Jiend_16460 (orn)
Messenger RNA biogenesis [BR:
meno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Jiend_16460 (orn)
Ribosome biogenesis [BR:
meno03009
]
Eukaryotic type
Pre-60S particles
RNases
Jiend_16460 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BCJ58224
LinkDB
All DBs
Position
complement(1700921..1701511)
Genome browser
AA seq
196 aa
AA seq
DB search
MADLLVWIDCEMTGLDLGSDKLIEVAALVTDPDLNVLGEGVDVVIHADDAALDAMPEIVR
TMHAKSGLTEEVRRSVVTLAEAEDLVLDYITQHVKDPRTAPLCGNSIATDRGFIARDMTR
LDAHLHYRMIDVSSIKELCRRWYPRVYFGQPQKGLAHRALADIRESIRELEYYRRTIFVP
LPGPDVESAKAIAAGL
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatctcctcgtctggatcgactgtgagatgaccggtctcgacctcggcagcgac
aagctgatcgaggtcgcggcactggtcaccgaccctgacctcaacgtgctgggtgagggg
gtggacgtggtgatccatgccgacgacgcggcgctcgacgcgatgccggagatcgtccgg
acgatgcacgccaagtcggggctgaccgaggaggtccggcgctcggtcgtcaccctggcc
gaggccgaggatctggtgctcgactacatcacccagcacgtcaaggatccgcgtaccgcc
ccgctctgtggcaactcgatcgccaccgatcgcggcttcatcgcccgggacatgacccgt
ctcgacgcccacctgcactaccgcatgatcgacgtctcctcgatcaaggagctgtgccgc
cgctggtacccgcgggtgtacttcggccagccgcagaagggcctggcgcaccgggcgctg
gccgacatccgggagagcatccgcgagttggagtactaccggcgcaccatcttcgtgccg
ctgcccggtcccgacgtggagagcgccaaggccatcgcggccggcctctga
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