Micromonospora endophytica: Jiend_23230
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Entry
Jiend_23230 CDS
T08807
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meno03016
]
Jiend_23230
Enzymes [BR:
meno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Jiend_23230
Transfer RNA biogenesis [BR:
meno03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Jiend_23230
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BCJ58901
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All DBs
Position
complement(2389594..2390259)
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AA seq
221 aa
AA seq
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MRLFTAVYPPAEAVTHLTARLAGLRLGAAAAAGTNVRLVDPARAHLTLAFLGEVDPARLA
EIRHALQHAVAAAPTGPPVLRLGGGGRFGWGRSTVLWIDVRGDVSRLVALAAAVRTELAE
VGVPTDEKPFRPHLTIARPGDRLTHADIEADLATLDGYLGPPWSAGELVLVHSRPGPRRA
ITASPPAHSDRDSARSLLVRDLLPRGRRSAILHFWSLFCPR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgagactcttcaccgctgtctatccgccggccgaggccgtcacgcacctgaccgcccgg
ttggccgggttgcggctcggtgcggccgcggcggccggcacgaacgtacggcttgtcgac
ccggcccgggctcacctcacgctcgcctttctcggtgaggtggaccccgcacggctggcc
gagatacggcacgccctccagcacgccgtcgccgccgctcccaccggcccgcccgtgctg
cggctgggcggcggaggccgattcggctgggggcgcagcaccgtgctctggatcgacgta
cgcggcgacgtctcccgcctggtggcactggccgctgccgtccgtaccgaactggccgag
gtcggggtgcccaccgacgagaagcccttccggccgcacctgaccatcgcccgccccggt
gaccggctgacgcacgccgacatcgaagccgacctggccacgctcgacggctacctcggc
ccgccctggtcggcaggtgaactggtgctggtgcacagccgacccggcccccgccgagct
atcaccgcctcgccacctgcccactctgaccgagactcagcccgctctctcctagtccga
gatctcctgccgcgaggcaggcggagcgcgatcttgcacttctggtcgctattttgcccg
cgttag
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