Micromonospora endophytica: Jiend_23580 Help Entry Jiend_23580       CDS       T08807                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism meno  Micromonospora endophytica Pathway meno03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:meno00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     Jiend_23580  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:meno03400]     Jiend_23580 Enzymes [BR:meno01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      Jiend_23580 DNA repair and recombination proteins [BR:meno03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      Jiend_23580 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 Motif Other DBs NCBI-ProteinID:  BCJ58936 UniProt:  A0A2W2D483 LinkDB All DBs Position complement(2425943..2426884) Genome browser AA seq 313 aa AA seqDB search MPGAPLKPMLAMTGPLPAGGGWAYEFKWDGVRALADIAAGRQRLYARSGAEITTAYPELI PLAEQVDDALLDGEVVLFDQAGQPSFTALAERMHVRNPAKAARLAATVPVTYMIFDLLRL RGTDLTGWPYARRRDTLDELGLGAARWAVPPVFADGPATYAAAGEHGLEGVMAKRRDSAY RPGVRSPDWVKVKLEVTGDFVVGGWRPGARKIGGLLVGVPGAGGRLVYRGRVGGGIGAAL ERELLRELEPLRTAASPFAGDVPRADARAAIWVTPQVVVEVKYGQRTPDGRLRFPRILRL RPDKPAEEVDDAS NT seq 942 nt NT seq  +upstreamnt  +downstreamnt gtgcccggtgcgccgctcaagccgatgctcgcgatgaccgggccactcccggccggcggg ggctgggcgtacgagttcaagtgggacggcgtacgcgcgctcgccgacatcgccgccggg cggcagcgcctctacgcccgctccggcgcggagatcaccaccgcgtacccggaactgatc ccgctcgccgagcaggtggacgacgcgctgctcgacggcgaggtggtcctcttcgaccag gccggacagccctcgttcaccgcgctggcggagcggatgcacgtacgaaatccggcgaag gcggcccgactggcggcgaccgtacccgtcacgtacatgatcttcgacttgttgcgactg cgcggcacggacctcaccggatggccgtacgcccgccgccgggacaccctcgacgagctg gggttgggtgcggcgcggtgggccgtgcccccggtcttcgccgacggcccggccacctac gcggcggccggtgagcacggcctggagggggtgatggcgaagcggcgcgactcggcctac cggcccggggtccgctcaccggactgggtcaaggtcaaacttgaggtgacaggcgacttc gtggtcggcggctggcgacccggcgcgcgcaagatcggcggcctgctggtcggggtgccc ggcgccggcgggcggctcgtctaccggggtcgggtcggcggcggtatcggcgcggccctg gaacgggaactgctgcgcgagttggagccgctgcgcaccgccgcgtcaccgttcgcaggc gacgtgccccgggcggatgcccgtgccgcgatctgggtaacaccacaggtggtagtggag gtcaagtacggccaacggacgccggacggacggctgcggttcccccggatcctgcggctg cggcccgacaaaccggccgaggaggtcgacgatgccagctga

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