Micromonospora endophytica: Jiend_28340
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Entry
Jiend_28340 CDS
T08807
Symbol
gyrB_2
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meno03032
]
Jiend_28340 (gyrB_2)
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_28340 (gyrB_2)
Enzymes [BR:
meno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Jiend_28340 (gyrB_2)
DNA replication proteins [BR:
meno03032
]
Prokaryotic type
DNA Topoisomerases
Jiend_28340 (gyrB_2)
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Jiend_28340 (gyrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BCJ59412
LinkDB
All DBs
Position
complement(2893528..2895474)
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AA seq
648 aa
AA seq
DB search
MAAQDNQQYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGYCD
TIDVVLLADGGVRVTDNGRGFPVDLHPKLKKPGVEVALTVLHAGGKFDGKAYAVSGGLHG
VGVSVVNALSTKMAVEIHKTGFVWRQEYHHSKPTELLKGEPTDRTGSAVSFWPDPDVFET
VEFDFQTIYRRLQEMAFLTRGLTIHLLDERVPAGEEGKTREVTFKYDGGIADFVRHLNAS
KSPMHKTVIEFGAEEEGMSLEIAMQWNESYGESVYTFANNINTHEGGTHEEGFRAALTSV
VNRYGADKKLLKGDEKLSGEDIREGLAAIISVKLTNPQFEGQTKTKLGNTPVKSFVQRVC
NDRLVDWLDRNPAEAKIIITKASQAARARIAAQQARKLARRKSLLESGSMPGKLADCQST
DPRESEVFIVEGDSAGGSAKQGRDPRTQAILPIRGKILNVEKARIDRVLKNNEVQALITA
LGTGIHDDFDMEKLRYHKVVLMADADVDGQHIQTLLLTLLFRFMRPLVELGHVYLAAPPL
YKIKWNRKGDDAQYAYSDRERDGLIALRQQKKPNAKPDDIQRFKGLGEMNYPELWETTMN
PATRTLRQVTLDDAATADELFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgcaggacaatcagcagtacggcgcagaatcgatcaccgtcctcgaagggctg
gaggcggtccgcaagcggcccggtatgtacatcgggtcgaccggcgagcgcggcctgcac
cacctggtgtgggaggtggtcgacaacgcggtcgacgaggcgctggccggctactgcgac
accatcgacgtggtgctgctcgccgacggcggggtccgggtcaccgacaacggccggggc
ttcccggtcgacctgcaccccaagctcaagaagccgggtgtcgaggtggcactcaccgtg
ctgcacgcgggcggcaagttcgacggcaaggcgtacgccgtctccggcggcctgcacggc
gtcggcgtctccgtggtgaacgcactctccaccaagatggccgtggagatccacaagacc
ggcttcgtctggcggcaggagtaccaccactccaagccgaccgagttgctcaagggtgag
ccgaccgaccggaccggctccgcggtctccttctggcccgaccccgacgtcttcgagacc
gtcgagttcgacttccagaccatctaccgccggctccaggagatggccttcctcacccgc
ggcctcaccatccacctgctcgacgagcgggtcccggcgggcgaggagggcaagacccgc
gaggtcaccttcaagtacgacggcggcatcgccgacttcgtccggcacctcaacgcctcg
aagagcccgatgcacaagacggtgatcgagttcggtgccgaggaagagggcatgtccctc
gagatcgccatgcagtggaacgagtcgtacggcgaatcggtctacaccttcgccaacaac
atcaacacccacgagggtggcacccacgaggagggcttccgggccgcgctgaccagcgtg
gtcaaccgctacggcgcggacaagaagctgctcaagggcgacgagaagctctccggcgag
gacatccgcgagggcctcgcggcgatcatctccgtcaagctgaccaacccgcagttcgag
ggccagaccaagaccaagctgggcaacaccccggtgaagagcttcgtccagcgggtctgc
aacgaccggctggtcgactggctggaccgcaacccggccgaagcgaagatcattatcacc
aaggcgtcgcaggccgcccgcgcccggatcgccgcccagcaggcccgcaagctggcccgc
cgcaagtcgctgctggagtccggctcgatgccgggcaagctggccgactgccagtcgacc
gatccgcgcgagtccgaggtcttcatcgtcgagggcgactcggccggcggctcggccaag
cagggccgcgacccgcgtacccaggcgatcctgccgatccgcggcaagatcctgaacgtg
gagaaggcccggatcgaccgggtgctcaagaacaacgaggtgcaggcgctgatcaccgcg
ctgggcaccggcatccacgacgacttcgacatggagaagctgcggtaccacaaggtggtg
ctgatggccgacgccgacgtcgacggccagcacatccagacgctgctgctcaccctgctg
ttccggttcatgcgtccgctcgtcgagctggggcacgtctacctggccgccccgccgctc
tacaagatcaagtggaaccggaagggcgacgacgcgcagtacgcgtactccgaccgggag
cgcgacggcctgatcgcgctgcgtcagcagaagaagccgaacgccaagccggacgacatc
cagcggttcaagggcctcggcgagatgaactacccggagctgtgggagaccacgatgaac
ccggccacccgtacgctgcgccaggtcaccctggacgacgcggccaccgccgacgagctg
ttcagcgtgctgatgggcgaggacgtcgaggcccggcgctcattcatccagcgcaacgcc
aaggacgtgcgcttcctggacatctga
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