Micromonospora endophytica: Jiend_32940
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Entry
Jiend_32940 CDS
T08807
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_32940 (radA)
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Jiend_32940 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
NACHT
AAA_22
DUF7129
AAA_16
AAA_30
ABC_tran
NTPase_1
DUF7125
nSTAND3
AAA_29
Lon_C
AAA_5
Diacid_rec
RsgA_GTPase
AAA_14
TsaE
AAA_24
DZR
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
BCJ59872
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Position
complement(3374350..3375801)
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AA seq
483 aa
AA seq
DB search
MSISRSTSARGTGGGRGKAAAREPRPAYECDACGHQPPKWVGRCPECGEWGSVVECTVTG
PTVSGRVVSSRMPAEPARPIATISAAPARARPTGVSELDRVLGGGLVPGAVVLLAGEPGV
GKSTLLLDVAQQWAAGAGSPSLVVSGEESVSQVRLRAERMGTLHDQLYLAAENDLAAVLG
HLDAVKPGLLVLDSVQTISTAGTEGVSGGVTQVRAVTAAVVAVAKERGIATVLVGHVTKD
GQVAGPRVLEHLVDVVLHFEGDKHSSLRMVRGVKNRFGAADEVGCFEMHESGISSLADPS
GLFLTRYSEPVPGTCVTVAMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAV
LQRRTERLTLHDREVFAATVGGIRVVEPAADLAVALAVASGGLNLAIAPQLVAIGEVGLT
GEVRRVGAVPRRLAEAARLGFRLALVPQGCGPASTGAGPDQLRVIEVGDVRSALQAAARV
SAE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatctcccgatcgacctcggcccgaggcacgggtggcgggcgcggcaaggccgcc
gcccgcgagccccgccccgcgtacgagtgcgacgcctgcggtcaccagccaccgaaatgg
gtgggccgctgccccgagtgtggcgagtggggttcggtggtcgaatgcaccgtcaccggg
ccgaccgtctccggccgggtcgtcagttcccggatgcctgccgaaccggcccggccgatc
gccaccatcagcgcggcaccggcccgggcccgacccaccggcgtcagcgaactcgaccgg
gtgctcggcggtgggttggtgccgggggcggtggtgctgctcgccggtgagccgggcgtc
ggcaagtccaccctgttgctggacgtggcgcagcagtgggccgcaggtgccggcagcccg
tccctggtggtcagcggcgaggagtcggtgagccaggtgcgactgcgggccgagcgcatg
ggcaccctgcacgaccagctctacctggccgctgagaacgacctcgcggcggtgctcggc
catctcgacgcggtaaagcccggcctgctggtgctcgactcggtgcagaccatctccacc
gccggcaccgagggggtgtccggcggggtgacccaggtccgggcggtcaccgccgccgtg
gtggcggtcgccaaggagcgtgggatcgcgaccgtgctggtcggccacgtcaccaaggac
ggacaggtggccggtccccgggtgctggagcacctggtcgacgtggtgctgcacttcgag
ggtgacaagcactcgtccctgcggatggtgcgcggggtcaagaaccgcttcggggctgcc
gacgaggtgggctgcttcgagatgcacgagagcggcatcagcagcctggccgacccgtcc
ggactgttcctgacccgctactcggagccggtgccgggcacctgcgtgacggtggccatg
gaggggcgtcgggcacttgtcaccgaggtgcaggcgctgatcggcgcgacggtggccggc
tctccccggcgcacggtctccgggttggattcggcccggctggcgatggtgctggcggtg
ctccagcgccgcaccgaacggctcaccctgcacgaccgggaggtcttcgcggccactgtc
ggcggcatccgggtggtggagcccgcagccgacctcgcggtggcgctggccgtcgcctcc
ggcgggctcaacctggccatcgcaccgcagctggtggccatcggcgaagtggggctgacc
ggcgaggtgcgtcgggtgggcgcggtgccccgccggctggccgaggcggcccggctcggc
ttccggctggccctggtgccgcagggttgcggcccggcgagcaccggcgccggtcccgac
cagctgcgggtgatcgaggtcggcgacgtccgttcggcgctccaggccgcggcccgggtg
tcggcggagtga
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