Micromonospora endophytica: Jiend_36770
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Entry
Jiend_36770 CDS
T08807
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
meno
Micromonospora endophytica
Pathway
meno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Jiend_36770 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meno03019
]
Jiend_36770 (groL1)
03110 Chaperones and folding catalysts [BR:
meno03110
]
Jiend_36770 (groL1)
03029 Mitochondrial biogenesis [BR:
meno03029
]
Jiend_36770 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
meno04147
]
Jiend_36770 (groL1)
Enzymes [BR:
meno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Jiend_36770 (groL1)
Messenger RNA biogenesis [BR:
meno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Jiend_36770 (groL1)
Chaperones and folding catalysts [BR:
meno03110
]
Heat shock proteins
HSP60 / Chaperonin
Jiend_36770 (groL1)
Mitochondrial biogenesis [BR:
meno03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Jiend_36770 (groL1)
Exosome [BR:
meno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Jiend_36770 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
Jiend_36770 (groL1)
Exosomal proteins of breast cancer cells
Jiend_36770 (groL1)
Exosomal proteins of colorectal cancer cells
Jiend_36770 (groL1)
Exosomal proteins of bladder cancer cells
Jiend_36770 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
UreE_C
Motif
Other DBs
NCBI-ProteinID:
BCJ60255
LinkDB
All DBs
Position
3757563..3759215
Genome browser
AA seq
550 aa
AA seq
DB search
MAKILSFSDDARHQLEHGVNALANAVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LTNPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVREGLRNVTAGANPAGLKRGVD
AAAAKVSEALLGKAVEVSDKKSVAHVATISAQDATIGELIAEAMERVGRDGVITVEEGSA
LHTELDVTEGLQFDKGFISPNFVTDAEGQEAVLEDAYILITTQKISAIEELLPLLEKVLQ
NSKPLLIIAEDVEGQALSTLVVNSIRKTLKVCAVKAPGFGDRRKAMLQDMAILTGAELVA
PELGYKLDQVGLEVLGTARRIVVDKENTTIVDGGGQASEVADRVAQIRKEIEASDSEWDR
EKLAERLAKLSGGIAVVKVGAATEVEMKERKHRIEDAIAATKAAVEEGTVPGGGAALAQI
LPVLDDDLGFTGDEKVGVSIVRKALVEPLRWIAQNAGHDGYVVVQKVAGSQWGHGLDAAI
GDYVDLVGSGIIDPVKVTRNAVTNAASIAGLLLTTESLVVDKPAEPEAAAGGHGHSHGGH
GHSHQHGPGF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgagcttctcggacgacgcccggcaccagctggagcatggtgtcaac
gcgctcgcgaacgcggtcaaggtcaccctcgggccgcgcgggcgcaacgtcgtcctggac
aagaaattcggtgcgcccacgatcaccaacgatggcgtgaccatcgccaaggagatcgag
ctcaccaacccgtacgagaacctcggcgctcagctggtcaaggaggtggcgaccaagacc
aacgacgtcgccggcgacgggaccaccaccgcgaccgtgttggcccaggcgatggtgcgc
gagggcctgcgcaacgtgaccgcgggtgccaacccggccggcctcaagcggggcgtcgac
gccgccgccgccaaggtctccgaggcgctgctcggcaaggccgtcgaggtctccgacaag
aagtcggtcgcgcacgtcgcgacgatctcggcgcaggacgccaccatcggtgagctgatc
gccgaggcgatggagcgggtcggccgcgacggtgtgatcaccgtcgaggagggctccgcc
ctgcacaccgagctggacgtcaccgagggcctccagttcgacaagggcttcatctcgccg
aacttcgtcaccgacgcggaggggcaggaggccgtcctggaggacgcgtacatcctgatc
accacgcagaagatctcggcgatcgaggagctgctgccgctgctggagaaggttctccag
aacagcaagccgctgttgatcatcgccgaggacgtcgagggccaggcgctgtccacgctc
gtggtcaactcgatccgcaagaccctcaaggtctgcgcggtcaaggcccccggcttcggt
gaccgccgcaaggcgatgctccaggacatggcgatcctcaccggtgccgagctggtcgcc
cccgagctgggctacaagctcgaccaggtcggcctggaggtgctgggcaccgcccggcgc
atcgtggtcgacaaggagaacaccacaatcgtcgacggtggcgggcaggccagcgaggtc
gccgaccgggtcgcccagatccgcaaggagatcgaggcttcggactccgagtgggaccgg
gagaagctcgccgagcggctggccaagctctccggtggcatcgcggtggtcaaggtcggc
gcggccaccgaggtcgagatgaaggagcgcaagcaccgcatcgaggacgccatcgccgcg
accaaggccgcggtcgaggagggtacggtgcctggcggcggtgccgccctggcgcagatc
ctgccggtgctcgacgacgacctcggcttcaccggcgacgagaaggtcggcgtctcgatc
gtgcgtaaggcacttgtcgagccgctgcgctggatcgcccagaacgccggccacgacggc
tacgtggtggtgcagaaggtcgccggcagccagtggggccacggcctcgacgccgccatc
ggcgactacgtcgacctggtcggcagcggcatcatcgacccggtcaaggtgacccgcaac
gcggtcaccaacgccgcgtccatcgccggtctgctactgaccaccgagagcctcgtggtg
gacaagccggccgagccggaggccgccgccggtgggcacggccactcgcacggtggccac
gggcacagccaccagcacggcccgggtttctga
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