Micromonospora endophytica: Jiend_38260
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Entry
Jiend_38260 CDS
T08807
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meno
Micromonospora endophytica
Pathway
meno03420
Nucleotide excision repair
meno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Jiend_38260
03430 Mismatch repair
Jiend_38260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_38260
Enzymes [BR:
meno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Jiend_38260
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Jiend_38260
MMR (mismatch excision repair)
Other MMR factors
Jiend_38260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCJ60404
LinkDB
All DBs
Position
3911128..3913278
Genome browser
AA seq
716 aa
AA seq
DB search
MVVNSASERVLAGLDPEQRSAVTAPAGPVCVLAGAGTGKTRAVTSRIAHRALTGEISARH
VLAVTFTARAAAELRHRLTSLGVAGVQARTFHAAALRQVRYFAPRLLDGRAMPELLDSKV
RLVTLAAARAGLRADRTAARDLAGEIEWAKSALVEPGEYVVAAAKSLRETPYEPAQVAEV
FAAYEKLKRSGGVIDFEDVLRAAVWGIEEHPDVAEQVRNQYRHFVVDEYQDVNPLQQRLL
DAWLGGRDDVTVVGDASQTIYSFTGATSSYLVDFPRRHRGATVVRLVRDYRSTPQVVGLA
NAVISQARGTEARLRLELVGQRPAGPEPERRIFTDEPAEANAVAARCRALIDAGTPAREI
AVLFRVNAQSEAYEKALGEAGVPYVVQGAERFFERTEVRQAMVALRAATRALPGETPLPT
AVVEALAAVGWAPDAPPPGGAARERWEALAALVQLAEEYAATPQLLPLGAAATVERQVTL
ADFTDELARRAAQQHAPTVEGVTLASLHSAKGLEWDAVFLIGLADGTLPTTYARTAEQVE
EERRLLYVGITRARQWLWLSYASARSPGGRARRPCRFLPQLAPAAGTERATGAGPGPRPQ
RRANRIVSCRICGTTLLAGADRKLGRCATCPSDIDDELHERLREWRSRVASAQKVPAYVV
FTDATLVALAERRPNRTEELVAIAGIGPRKLGLYGTAVLALVGGAAVDEICPEKSF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtggtggtcaactccgcgtcggaacgcgtgctcgccgggctcgacccggagcaacgctcg
gcggtgaccgcccccgccgggccggtctgcgtgcttgccggtgccggcaccggcaagacc
cgggcggtcacgtcccgcatcgcccaccgggcgttgaccggcgagatctccgcccggcac
gtgctcgcggtcaccttcaccgcccgggccgccgcggaactgcgccaccgactcacctcg
ctcggcgtggccggcgtgcaggcgcgtaccttccacgccgcggcgctgcgccaggtgcgg
tacttcgccccccggctgctcgacggccgggccatgcccgagctgctggacagcaaggtc
cggctggtcaccctggcggcggcccgagccggcctccgggccgaccggaccgccgcccgg
gacctcgccggtgagatcgagtgggccaaatccgcactggtcgagccgggggagtacgtc
gtcgccgcggccaagtcgctgcgcgagacaccgtacgagccggcacaggtggccgaggtc
ttcgccgcgtacgagaagctcaagcgctccggcggagtgatcgacttcgaggacgtactg
cgggccgcggtctggggcatcgaggagcatccggacgtcgccgagcaggtccgcaaccag
taccggcacttcgtcgtcgacgagtaccaggacgtcaacccgttgcagcaacggctgctc
gacgcctggctgggcggtcgggacgacgtgacggtggtcggcgacgccagccagacgatc
tactcgttcaccggggcgacctcgtcgtacctggtggacttcccgcgccggcaccggggt
gccacagtggtccggctggtccgtgactaccggtccacgccccaggtggtcggactcgcc
aacgccgtcatctcgcaggcccgggggaccgaggcgcggctgcggctggaactggtgggc
caacgtccggccggccccgaaccggaacggcggatcttcaccgacgaacccgccgaggcc
aacgcggtcgccgcccgctgccgtgcgctcatcgacgccggcacgccggcccgcgagatc
gcggtgctgttccgcgtcaacgcccagtccgaggcgtacgagaaggcgctcggtgaggcc
ggcgtgccgtacgtggtgcagggtgccgagcggttcttcgaacgcaccgaggtacgccag
gcgatggtggcgctgcgcgcggccaccagggctctccccggtgagacgccgctgccgacg
gcggtggtcgaggcgctcgccgccgtcgggtgggcacctgacgcgccaccgcccggcggc
gccgcccgggaacgctgggaggcgctcgccgcgctggtccaactcgccgaggagtacgcc
gccacgccgcaactcctgccgctaggtgccgccgccacggtcgagcgccaggtcaccctc
gccgacttcaccgatgaactggcccggcgggcggcgcagcagcacgcgccgaccgtggag
ggcgtgaccctggcctccctgcactccgccaagggcctggaatgggacgcggtgttcctg
atcggtctcgccgacggcaccctgcccaccacgtacgcgcgcaccgccgagcaggtcgag
gaggagcggcggctgctctacgtcggcatcacccgggcccggcagtggctctggctgtcg
tacgcctcggcgcgctcgccgggtgggcgagcccggcggccctgccggttcctgccccaa
ctcgcccccgccgccgggaccgagcgggccaccggcgctggtcccggacctcgcccgcag
cgacgtgccaaccggatcgtctcctgccggatctgcggcaccaccctgctcgccggggcc
gaccgcaagctcggccgctgcgccacctgcccgtccgacatcgacgacgagctgcacgaa
cggctgcgcgagtggcggtcgcgggtggcctcggcgcagaaggtgcccgcgtacgtcgtc
ttcaccgacgcgacgcttgtggcgcttgccgaacggcggccgaaccggaccgaggaactc
gtcgcgatcgccggtatcgggccgcgaaagctgggcctgtacggcacggcggtactggcc
ctggtgggcggcgcggcggtggacgaaatctgcccagagaaaagtttctga
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