Micromonospora endophytica: Jiend_45140
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Entry
Jiend_45140 CDS
T08807
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
meno
Micromonospora endophytica
Pathway
meno03030
DNA replication
meno03430
Mismatch repair
meno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Jiend_45140 (dnaQ)
03430 Mismatch repair
Jiend_45140 (dnaQ)
03440 Homologous recombination
Jiend_45140 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meno03032
]
Jiend_45140 (dnaQ)
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_45140 (dnaQ)
Enzymes [BR:
meno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Jiend_45140 (dnaQ)
DNA replication proteins [BR:
meno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Jiend_45140 (dnaQ)
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Jiend_45140 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BCJ61092
LinkDB
All DBs
Position
complement(4625069..4626874)
Genome browser
AA seq
601 aa
AA seq
DB search
MPPMAGQEYLQPALAGLDPTVDGVDPALPLHATTFVVVDLETTGGAPDGGGITEIGAVKV
RGGEELGVLATLVNPGVPIPPFITVLTGITQAMLLPAPPIEQVLPSFLEFVTDAVLVAHN
APYDVGFLKAACARHSYRWPNPKVLDTAALARRVLLRDEVPNRKLATLAAYFRASTTPTH
RALDDARATVDVLHGLIGRLGGHRVDTVGDAIEFSRAVTPTQRRKRHLADGLPRSPGVYI
FRAADDRPLYVGTSRDIATRVRSYFTASEKRARISEMLAAAERVEAVECAHSLEAEVREL
RLIGAHAPPYNRRSKFPERVVWLKLTDGPYPRLSVVRQLSPDDRAYLGPFSSRRAAELAA
AGFHDAVPLRQCTHRLSLRTVTPACALAELGRCPAPCEHRITPEEYAERAVTPFATSTTG
DPQPVVDVLLARIEGLAADKRYEEAAVLRSRLVAVLRAAVRMQRLAALTGIAELAAARPA
AGGGWELALVRHGRLAGAGVSPPGSTRDRHSPSSGPPRRRSHPATARSRRPAPRSPNASC
PGWNDRRPDLSRCPTPGRPRWPVQPASVTCWPRPRTPDPTNSGPNAYEQVSDRTTSAHLV
C
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgatggcaggacaggaatacctccaacccgcactggccgggctcgacccgaca
gtcgacggggtcgaccccgcgttgccgctgcacgcgacgaccttcgtcgtggtcgacctg
gagaccaccggcggcgcgccggacggcggcggcatcaccgagatcggcgcggtcaaggtg
cgcggcggcgaggagttgggggtgttggcgaccctggtcaacccgggtgtgccgattccg
ccgttcatcaccgtgctgaccggcatcacccaggcgatgctgctgccggcaccgccgatc
gagcaggtgctgccgagtttcctggagttcgtcaccgacgccgtgctggtggcgcacaac
gcgccgtacgatgtcggtttcctcaaggcggcctgcgcccggcacagctatcgctggccg
aacccgaaggtgctggacaccgcggcgctggcccggcgggtgctgctgcgcgacgaggtg
cccaaccgcaagttggccacgctcgccgcgtacttccgggccagcaccacaccgacgcac
cgggcgctggacgacgcccgggccaccgtcgacgtgctgcacgggctgatcgggcggctc
ggcgggcaccgggtggacaccgtcggtgacgccatcgagttctcccgcgcggtcaccccc
acccagcgccgcaagcgccacctggccgacggcctgccgcgttcgcccggggtctacatc
ttccgggccgccgacgaccgaccgttgtacgtcggcacctcccgcgacatcgccacccgg
gtgcgcagctacttcaccgcctccgagaagcgtgcccgaatctcggagatgcttgccgcc
gccgagcgggtcgaggcggtcgagtgcgcgcactcgctggaggcggaggtgcgtgagctg
cggctgatcggggcgcacgcgccgccgtacaatcgccgttcgaagttccccgagcgggtg
gtctggctgaagctgaccgacgggccgtacccccggttgtcggtggtccggcagctctcc
cccgacgaccgcgcctacctcgggcccttctcctcccggcgggccgcggagctggccgcc
gccgggttccacgacgcggtgccgctgcgtcagtgcactcaccgactgtcgttacgcacc
gtaacgcccgcctgcgcgctggccgagctgggtcgctgcccggcaccgtgcgagcaccgg
atcacccccgaggagtacgccgaacgcgcggtcaccccgttcgccacgtccaccaccggc
gacccccagccggtggtggacgtcctgctcgcccggatcgaggggctggcggccgacaag
cggtacgaggaggcggcggtgctccggtcccggttggtcgcggtgttgcgggccgccgta
cgcatgcagcggctggccgcactgaccgggatcgccgagctggccgccgcccggcccgcc
gccggcggcggctgggagctggcgctggtgcggcacggccgactggccggggccggtgtc
tcgccgcccgggtccacccgcgaccgacactcgccgtcatccgggccaccgcggagacgg
tctcacccggccacggcccggtcccggcggccagccccgaggagtccgaacgcatcctgt
cctggttggaacgaccggagaccagacttgtcgagatgtccgacgcctgggcgtccccgg
tggccggtgcagcccgcttccgtgacctgctggccaaggccgagaacgccggatcccaca
aactctggtccgaacgcctatgagcaagtgtccgatcggacgacctccgctcacttagtc
tgttaa
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