Micromonospora endophytica: Jiend_46900
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Entry
Jiend_46900 CDS
T08807
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
meno
Micromonospora endophytica
Pathway
meno03030
DNA replication
meno03410
Base excision repair
meno03420
Nucleotide excision repair
meno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Jiend_46900
03410 Base excision repair
Jiend_46900
03420 Nucleotide excision repair
Jiend_46900
03440 Homologous recombination
Jiend_46900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meno03032
]
Jiend_46900
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_46900
Enzymes [BR:
meno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Jiend_46900
DNA replication proteins [BR:
meno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Jiend_46900
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Jiend_46900
NER (nucleotide excision repair)
GGR (global genome repair) factors
Jiend_46900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BCJ61268
LinkDB
All DBs
Position
4812943..4815705
Genome browser
AA seq
920 aa
AA seq
DB search
MSAVRARVAAVTATTPRLLLVDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINV
LRDERPTHIVVAFDVSRRSFRTEKYAEYKAGRSETPADFKGQVSLVKEVLAALRVPVVEK
EGYEADDIIATLACQARDQGMSVLISTGDRDAFQLVDEQITVLYPRKGVSDLARMDPAAV
EAKYGVPPQRYRDLAALVGEKSDNLPGVPGVGDKTAAKWINAYGGVEGIIARADEIKGKA
GDSLRERLADVIRNYDINCLVADLELPVRPEDARWPGWDREAVHQVFDTLQFRILRDRLY
QYLDAVEPEAEAGFELAGEVLTAPGALAGWLATHAPAGAAAARADHSESAAVGVAVKLDT
GPNRRHTAGVTGMALATADGAAAWFDPSKLDATDEAALAGWLADETRPKVLHDSKPAVLA
FAAHGWSLAGVSRDTQIAAYLARPDQRSYDLTDLALRYLHRELRVDTPNDGQLTLDGLGA
DGEAEQNLMLHARATLDLAEAIDAELSRDGEQSARLMAGVELPLMRVLADMERVGIAADT
DYLTELEAHFAAEVKAAAQGAYQVIGREFNLGSPKQLQEILFGDLNLPKTKKIKTGYTTD
ADALQWLYAQTEHPLLHHLLRHRDVARLKSTVDGLLKSVSDDGRIHTTFNQTVAATGRLS
STEPNLQNIPIRTEEGRRIRRAFVVGEGYECLLTADYSQIEMRIMAHLSADDALIEAFNS
GADFHAATASSVFGVPLAEVTPDQRRKIKAMNYGLAYGLSAFGLSQQLGITAEEARGLME
VYFAGFGGVRDYLNEVVARARQDGYTSTILGRRRYLPDLVSDNRQRREMAERMALNAPIQ
GSAADIIKVAMLHVDTALRDAGLRSRMLLQVHDELVFEVAPGERTALEELVRHQMGGAYP
LSVPLEVSVGEGRDWNSADH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtacgggctagagtcgctgccgtgacagctacgacgccgcgcctgctcctc
gtcgacggacactccctggcataccgggccttcttcgccctgcctgtggaaaacttctcc
accacgacggggcagccgacaaacgccgtctacggcttcacctcaatgttgatcaacgtg
ctgcgcgacgagcggccgacccacatcgtggtcgccttcgacgtgtcccgccgctccttc
cgcaccgagaagtacgcagaatacaaggccggtcgcagcgagactcccgccgacttcaag
ggccaggtcagcctggtcaaggaggtgctcgccgcgctgcgggtcccggtggtggagaag
gagggctacgaggccgacgacatcatcgcgaccctggcctgccaggcccgtgaccagggc
atgtcggtgctgatctccaccggtgaccgggacgccttccaactcgtcgacgagcagatc
accgtgctctacccgcgcaagggcgtctccgacctggcccggatggacccggccgcggtc
gaggcgaaatacggcgtgcccccccagcgctaccgcgacctggccgcgctcgtcggcgag
aagagcgacaacctcccgggcgtccccggggtcggcgacaagacggcagccaagtggatc
aatgcgtacggcggggtggagggcatcatcgcccgcgccgacgagatcaagggcaaggcc
ggcgacagcctgcgcgagcggctcgccgacgtgatccgcaactacgacatcaactgcctc
gtcgccgacctggagttgccggtccgacccgaggacgcccgctggccggggtgggaccgc
gaggcggtgcaccaggtcttcgacaccctccagttccgcatcctgcgggaccgcctctac
cagtacctcgacgctgtcgagccggaggcggaggcgggcttcgagctggccggtgaggtg
ctcaccgcaccgggcgccctggccggctggctggcgacgcacgcaccggcaggcgctgcc
gccgcgcgcgccgatcattcggagagcgccgcggtcggtgtggcggtcaagctcgacacc
ggccccaaccggcggcacaccgcaggcgtcaccggcatggccctggccaccgccgacggc
gcggcggcctggttcgacccgagcaaactcgacgccaccgacgaggcagcgctggccggg
tggctggccgacgagacccggccgaaggtgctgcacgacagcaagcccgcggtgctcgcc
ttcgccgcgcacggctggtccctcgcgggcgtcagccgcgacacccagatcgcggcctac
ctggcccgccccgaccaacggtcctacgacctgaccgacctggcgctgcgctacctgcac
cgcgagctgcgggtggacacgccgaacgacggccagttgacgctcgacgggctcggcgcg
gacggcgaggcggagcagaatctcatgctgcacgcccgggccaccctcgacctggccgag
gcgatcgacgccgagctgtcccgcgacggcgagcagtccgcccggctgatggccggggtg
gagctgcccttgatgcgggtgctcgccgacatggaacgcgtcggcatcgccgccgacacc
gactacctcaccgagctggaagcgcacttcgccgccgaggtgaaggccgccgcccagggg
gcgtaccaggtgatcggccgggagttcaacctcggctcgcccaagcagttgcaggagatc
ctcttcggcgacctgaacctgccgaagaccaagaagatcaagactgggtacaccaccgac
gccgacgccctccagtggctctacgcgcagaccgagcatccgctcctgcaccacctgctg
cggcaccgggacgtggcccggctcaagtcgacagtggacgggctgctcaagtcggtctcc
gacgacgggcgcatccacaccacgttcaaccagacggtggcggccaccggccggctctcc
tccaccgagcccaacctccagaacatccccatccgcaccgaggagggccggcggatccgc
cgggccttcgtggtgggcgagggctacgagtgcctgctcaccgccgactacagtcagatc
gaaatgcggatcatggcgcacctgtcggccgatgacgcgttgatcgaggcgttcaactcc
ggcgcggacttccacgccgccaccgcctcgtcggtgttcggggtgccgctggccgaggtc
accccggaccaacggcgcaagatcaaggcaatgaactacggcctggcgtacgggctgagc
gcgttcggcctctcccagcagctcggcatcaccgccgaggaggcccgcgggctgatggag
gtctacttcgccggcttcggcggcgtccgtgactacctcaacgaggtggtcgcccgggcc
cgtcaggacggctacacctccaccatcctgggtcgccgtcgctacctgcccgacctggtc
agcgacaaccggcagcggcgggagatggccgagcggatggccctcaacgccccgatccag
ggctccgcggcggacatcatcaaggtcgccatgctgcacgtcgacaccgcgctgcgcgac
gccggactgcgctcccggatgctgctccaggtgcacgacgagctggtcttcgaggtggca
ccgggggagcggacggcactggaggaactggtccggcaccagatgggtggtgcgtaccca
ctctccgtgccgctggaggtctccgtcggcgagggccgcgactggaacagcgccgaccac
tga
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